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Domain combinations for _gap_,50729,_gap_,50985,57903,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
50985 - RCC1/BLIP-II
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Phaseolus_vulgaris_v186   (French bean)   1
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Actinidia_chinensis_Hongyang_ 0
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 1
Oryza_nivara_22 2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4
Musa_balbisiana   (Balbis banana)   1

Strains
Genome     Number
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 3
Uniprot_2018_03_genome 380

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