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Domain combinations for _gap_,51110 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51110 - alpha-D-mannose-specific plant lectins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3
Daphnia_pulex_   (Common water flea)   0
Mnemiopsis_leidyi   (Sea walnut)   1
Hydra_vulgaris 2
Sphaeroforma_arctica_JP610_ 2
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 2
Mixia_osmundae_IAM_14324_v1.0 0
Rhodotorula_graminis_WP1_v1.0 0
Sphaerobolus_stellatus_v1.0 0
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Allomyces_macrogynus_ATCC_38327_ 0
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 35
Pinus_taeda   (Loblolly pine)   7
Picea_abies   (Norway spruce)   3
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 0
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   4
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   5
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   20
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   7
Manihot_esculenta_v147   (Cassava)   2
Populus_trichocarpa_v156   (Black cottonwood)   12
Vitis_vinifera_   (Wine grape)   5
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 0
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   17
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 4
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   4
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   2
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 6
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Chlorella_vulgaris_ 1
Chlamydomonas_reinhardtii_4.0 0
Micromonas_pusilla_CCMP1545_v3.0 0
Bigelowiella_natans_CCMP2755_22 0
Ectocarpus_siliculosus 1
Fragilariopsis_cylindrus 0
Tetrahymena_thermophila_SB210_1_ 1
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Leptolyngbya_sp._PCC_7376 1
Synechococcus_sp._PCC_6312 1
Acidimicrobium_ferrooxidans_DSM_10331 0
Catenulispora_acidiphila_DSM_44928 3
Kitasatospora_setae_KM-6054 0
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Actinoplanes_sp._N902-109 1
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Ruminococcus_albus_7 0
Paenibacillus_mucilaginosus_3016 1
Chlorobium_luteolum_DSM_273 1
Haliscomenobacter_hydrossis_DSM_1100 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Terriglobus_roseus_DSM_18391 0
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1
Geobacter_daltonii_FRC-32 0
Geobacter_uraniireducens_Rf4 0
Geobacter_metallireducens_GS-15 0
Pelobacter_propionicus_DSM_2379 0
Sorangium_cellulosum_'So_ce_56' 0
Cupriavidus_metallidurans_CH34 0
Burkholderia_pseudomallei_1106a 0
Asticcacaulis_excentricus_CB_48 1
Tistrella_mobilis_KA081020-065 1
Agrobacterium_vitis_S4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Paenibacillus_mucilaginosus_K02 2
Singulisphaera_acidiphila_DSM_18658 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_K96243 0
Leisingera_methylohalidivorans_DSM_14336 0
Pseudomonas_fluorescens_F113 0

Longest transcript per gene
Genome     Number
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 5
Malus_x_domestica_(Duplicate)   (Apple)   20
Ricinus_communis__(Early_assembly)   (Castor bean)   6
Nicotiana_benthamiana_0.4.4_(Early_draft) 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
NCBI_plasmid_sequences_(Plasmids) 2
NCBI_viral_sequences_(Viral) 4
TargetDB__(Targets) 0
UniProt__viral_sequences_(Viral) 1
STRING_v9.0.5_(STRING) 44
NCBI_2017_08_genome 632
Uniprot_2018_03_genome 2010

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