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Domain combinations for _gap_,51110,_gap_,56112,_gap_,51110,_gap_,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51110 - alpha-D-mannose-specific plant lectins
56112 - Protein kinase-like (PK-like)
51110 - alpha-D-mannose-specific plant lectins
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pinus_taeda   (Loblolly pine)   2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4
Arabidopsis_thaliana_10   (Thale cress)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   1
Linum_usitatissimum_v200   (Flax)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Triticum_urartu_22 3
Oryza_barthii_22   (African wild rice)   6
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 4
Oryza_punctata_22 6
Oryza_nivara_22 7
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Setaria_italica_v164   (Foxtail millet)   1
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   2

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 2600
NCBI_2017_08_genome 173

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