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  Home > SCOP hierarchy > Domain combination - _gap_,51445,_gap_,49452,49452,81296,81296,51445,_gap_,51011

Domain combinations for _gap_,51445,_gap_,49452,49452,81296,81296,51445,_gap_,51011 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51445 - (Trans)glycosidases
49452 - Starch-binding domain-like
49452 - Starch-binding domain-like
81296 - E set domains
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 1

Strains
Genome     Number
Streptomyces_fulvissimus_DSM_40593 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
TargetDB__(Targets) 2
Uniprot_2018_03_genome 3626
NCBI_2017_08_genome 157

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.