SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - _gap_,51905,47576,_gap_,57716,_gap_

Domain combinations for _gap_,51905,47576,_gap_,57716,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51905 - FAD/NAD(P)-binding domain
47576 - Calponin-homology domain, CH-domain
57716 - Glucocorticoid receptor-like (DNA-binding domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 3

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Latimeria_chalumnae_76_1 (Coelacanth) 2

Takifugu_rubripes_76_4 (Torafugu) 2

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 2

Nasonia_vitripennis_ (Jewel wasp) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 10

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Tribolium_castaneum_3.0 (Red flour beetle) 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 7

Longest transcript per gene
Genome Number

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Danio_rerio_69_9 (Zebrafish) 2

Drosophila_melanogaster_69_5 (Fruit fly) 1

Others
Genome Number

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

STRING_v9.0.5_(STRING) 12

Uniprot_2018_03_genome 2660

NCBI_2017_08_genome 616

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]