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Domain combinations for _gap_,52025,53187,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52025 - PA domain
53187 - Zn-dependent exopeptidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Oikopleura_dioica 1
Adineta_vaga 1
Octopus_bimaculoides_280 2
Lottia_gigantea_   (Owl limpet)   1
Helobdella_robusta_ 0
Capitella_sp._I_ 1
Strigamia_maritima_22 1
Tetranychus_urticae_   (Two-spotted spider mite)   0
Caenorhabditis_brenneri_ 1
Monosiga_brevicollis_ 1
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Hebeloma_cylindrosporum_h7_v2.0 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_grisea_70-15_ 1
Sporotrichum_thermophile_ATCC_42464_ 1
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Verticillium_albo-atrum_VaMs.102_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Aspergillus_fumigatus_Af293 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_niger_22 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 0
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Medicago_truncatula_   (Barrel medic)   1
Malus_domestica_v196   (Apple)   1
Oryza_meridionalis_22 0
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Albugo_laibachii_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Fragilariopsis_cylindrus 0
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Saccharopolyspora_erythraea_NRRL_2338 1
Verrucosispora_maris_AB-18-032 1
Actinoplanes_missouriensis_431 1
Microbacterium_testaceum_StLB037 1
Sphaerobacter_thermophilus_DSM_20745 5
Clostridium_lentocellum_DSM_5427 1
[Ruminococcus]_torques 1
Roseburia_intestinalis 1
Coprothermobacter_proteolyticus_DSM_5265 1
Gemmatimonas_aurantiaca_T-27 3
Niastella_koreensis_GR20-10 1
Cellulophaga_lytica_DSM_7489 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Sebaldella_termitidis_ATCC_33386 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 1
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_salexigens_DSM_2638 0
Desulfovibrio_africanus_str._Walvis_Bay 1
Corallococcus_coralloides_DSM_2259 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Vibrio_furnissii_NCTC_11218 1
Rhodanobacter_denitrificans 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Pantoea_sp._At-9b 1
Candidatus_Korarchaeum_cryptofilum_OPF8 1
Ignisphaera_aggregans_DSM_17230 1
halophilic_archaeon_DL31 1
Thermococcus_sp._4557 1
Thermococcus_barophilus_MP 1
Pyrococcus_horikoshii_OT3 1

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Strains
Genome     Number
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Histoplasma_capsulatum_H88 1
Candida_albicans_WO-1_ 0
Saccharothrix_espanaensis_DSM_44229 1
Chthonomonas_calidirosea_T49 1
Clostridium_acidurici_9a 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 1
Roseburia_intestinalis_XB6B4 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Desulfovibrio_desulfuricans_ND132 1
Vibrio_nigripulchritudo_VibrioScope 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Rahnella_aquatilis_HX2 1
Thermococcus_litoralis_DSM_5473 1

Longest transcript per gene
Genome     Number
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
NCBI_plasmid_sequences_(Plasmids) 3
NCBI_2017_08_genome 930
Uniprot_2018_03_genome 8028
STRING_v9.0.5_(STRING) 32

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