SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,52047,_gap_,52058,_gap_,52200 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52047 - RNI-like
52058 - L domain-like
52200 - Toll/Interleukin receptor TIR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Canis_familiaris_76_3.1   (Dog)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Canis_familiaris_69_3.1   (Dog)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 209
NCBI_2017_08_genome 32

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