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Domain combinations for _gap_,52113,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52113 - BRCT domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   5
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   3
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   5
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   2
Felis_catus_76_6.2   (Domestic cat)   2
Equus_caballus_76_2   (Horse)   2
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   2
Xenopus_laevis_   (African clawed frog)   3
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   1
Oikopleura_dioica 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3
Adineta_vaga 6
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   1
Helobdella_robusta_ 1
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   1
Bombyx_mori_   (Domestic silkworm)   2
Nasonia_vitripennis_   (Jewel wasp)   3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   6
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 2
Drosophila_willistoni_1.3 2
Drosophila_pseudoobscura_2.13 3
Drosophila_persimilis_1.3 2
Drosophila_suzukii 2
Drosophila_yakuba_1.3 3
Drosophila_simulans_1.3 3
Drosophila_sechellia_1.3 4
Drosophila_melanogaster_76_5   (Fruit fly)   6
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 3
Megaselia_scalaris_22 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2
Anopheles_darlingi_22   (American malaria mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   2
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 0
Sarcoptes_scabiei 2
Tetranychus_urticae_   (Two-spotted spider mite)   1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 2
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 4
Caenorhabditis_elegans_76_235   (Roundworm)   3
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 2
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   4
Thelohanellus_kitauei 0
Acropora_digitifera_v1.0 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 3
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 3
Proterospongia_sp._ATCC_50818_ 2
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 3
Mortierella_verticillata_NRRL_6337_ 2
Phycomyces_blakesleeanus_ 2
Rhizopus_oryzae_RA_99-880_ 1
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 2
Malassezia_globosa_CBS_7966_ 7
Sporisorium_reilianum_22 3
Ustilago_maydis_ 3
Mixia_osmundae_IAM_14324_v1.0 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5
Melampsora_laricis-populina_ 5
Rhodotorula_graminis_WP1_v1.0 3
Sporobolomyces_roseus_IAM_13481_ 2
Microbotryum_violaceum_22 5
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 5
Piloderma_croceum_F_1598_v1.0 2
Serpula_lacrymans_var._lacrymans_S7.9_ 2
Coniophora_puteana 4
Hydnomerulius_pinastri_v2.0 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2
Pisolithus_microcarpus_441_v1.0 5
Pisolithus_tinctorius_Marx_270_v1.0 6
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 3
Pleurotus_ostreatus_   (Oyster mushroom)   3
Amanita_thiersii_Skay4041_v1.0 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Galerina_marginata_v1.0 4
Hebeloma_cylindrosporum_h7_v2.0 2
Laccaria_bicolor_S238N-H82_ 4
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 3
Stereum_hirsutum_FP-91666_SS1__v1.0 3
Heterobasidion_annosum_ 4
Gloeophyllum_trabeumv1.0 3
Punctularia_strigosozonata_v1.0 5
Sebacina_vermifera_MAFF_305830_v1.0 4
Fomitiporia_mediterranea_v1.0 3
Tulasnella_calospora_AL13/4D_v1.0 3
Postia_placenta_ 3
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 3
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 2
Dichomitus_squalens 2
Trametes_versicolor_v1.0 4
Tremella_mesenterica_   (Witches' butter)   4
Daldinia_eschscholzii_EC12_v1.0 5
Apiospora_montagnei_NRRL_25634_v1.0 6
Magnaporthe_poae_ATCC_64411_22 4
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 4
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 6
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 5
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 5
Cryphonectria_parasitica_   (Chestnut blight fungus)   5
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 4
Glomerella_graminicola_22 4
Fusarium_graminearum_ 4
Nectria_haematococca_mpVI_ 4
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 3
Trichoderma_asperellum_CBS_433.97_v1.0 4
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 5
Trichoderma_reesei_1.2 4
Trichoderma_virens_Gv29-8_ 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5
Trichoderma_harzianum_CBS_226.95_v1.0 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   3
Botrytis_cinerea_B05.10_ 4
Sclerotinia_sclerotiorum_ 4
Blumeria_graminis_22 4
Didymella_exigua_CBS_183.55_v1.0 4
Leptosphaeria_maculans_22 5
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4
Cochliobolus_victoriae_FI3_v1.0 5
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5
Alternaria_brassicicola_ 4
Cochliobolus_lunatus_m118_v2.0 6
Pyrenophora_teres_f._teres_22 6
Pyrenophora_tritici-repentis_ 5
Stagonospora_nodorum_ 5
Mycosphaerella_graminicola_IPO323_ 3
Zasmidium_cellare_ATCC_36951_v1.0 4
Dothistroma_septosporum 4
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 6
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 4
Coccidioides_immitis_RS_ 4
Ajellomyces_dermatitidis_SLH14081_ 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 4
Microsporum_canis_CBS_113480_ 5
Trichophyton_equinum_CBS_127.97_ 4
Trichophyton_verrucosum_HKI_0517_ 4
Arthroderma_benhamiae_CBS_112371_ 4
Trichophyton_tonsurans_CBS_112818_ 4
Trichophyton_rubrum_CBS_118892_ 4
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 4
Aspergillus_acidus_v1.0 5
Aspergillus_fumigatus_Af293 5
Aspergillus_brasiliensis_v1.0 5
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 3
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 2
Aspergillus_carbonarius_ITEM_5010_ 3
Neosartorya_fischeri_NRRL_181_ 4
Aspergillus_terreus_NIH2624_ 3
Aspergillus_tubingensis_v1.0 5
Aspergillus_wentii_v1.0 4
Aspergillus_oryzae_RIB40_ 3
Aspergillus_niger_22 4
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 4
Aspergillus_clavatus_NRRL_1_ 4
Penicillium_marneffei_ATCC_18224_ 5
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   4
Hansenula_polymorpha_v2.0 3
Dekkera_bruxellensis_CBS_2499_v2.0 2
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 2
Candida_tropicalis_MYA-3404_ 4
Candida_parapsilosis_ 3
Candida_albicans_SC5314 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 2
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 2
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 2
Zygosaccharomyces_rouxii_ 2
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   2
Saccharomyces_bayanus_MIT 3
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 5
Schizosaccharomyces_octosporus_yFS286_ 6
Schizosaccharomyces_japonicus_yFS275_ 6
Schizosaccharomyces_pombe   (Fission yeast)   5
Catenaria_anguillulae_PL171_v1.0 4
Allomyces_macrogynus_ATCC_38327_ 7
Spizellomyces_punctatus_DAOM_BR117_ 2
Dictyostelium_discoideum 4
Dictyostelium_purpureum_ 4
Entamoeba_dispar_1.2 3
Entamoeba_invadens_1.2 6
Entamoeba_histolytica_1 3
Selaginella_moellendorffii_ 8
Pinus_taeda   (Loblolly pine)   2
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3
Gossypium_raimondii_v221 7
Citrus_clementina_v165 6
Citrus_sinensis_v154   (Sweet orange)   4
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3
Capsella_rubella_v183 4
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   3
Carica_papaya_   (Papaya)   3
Medicago_truncatula_   (Barrel medic)   7
Phaseolus_vulgaris_v186   (French bean)   6
Glycine_max_v109   (Soybean)   11
Cucumis_sativus_v122   (Cucumber)   5
Fragaria_vesca_   (Wild strawberry)   5
Malus_domestica_v196   (Apple)   9
Prunus_persica_v139   (Peach)   7
Linum_usitatissimum_v200   (Flax)   8
Manihot_esculenta_v147   (Cassava)   6
Populus_trichocarpa_v156   (Black cottonwood)   5
Vitis_vinifera_   (Wine grape)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   5
Solanum_lycopersicum_v.2.3   (Tomato)   4
Solanum_tuberosum_   (Potato)   6
Actinidia_chinensis_Hongyang_ 2
Aquilegia_coerulea_v195 6
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   10
Aegilops_tauschii_22 8
Brachypodium_distachyon_   (Stiff brome)   5
Oryza_barthii_22   (African wild rice)   4
Oryza_meridionalis_22 4
Oryza_glumaepatula_22 11
Oryza_glaberrima   (African rice)   5
Oryza_punctata_22 6
Oryza_nivara_22 6
Oryza_brachyantha_22   (Malo sina)   4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   8
Oryza_sativa_v193   (Rice)   9
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   5
Panicum_virgatum_v202   (Switchgrass)   11
Setaria_italica_v164   (Foxtail millet)   5
Zea_mays_subsp._mays_   (Maize)   6
Zea_mays_v181   (Maize)   6
Sorghum_bicolor_   (Sorghum)   4
Musa_balbisiana   (Balbis banana)   3
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 3
Physcomitrella_patens 5
Coccomyxa_subellipsoidea_sp._C-169_v2 3
Asterochloris_sp._Cgr/DA1pho_v1.0 3
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 3
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 3
Ostreococcus_sp._RCC809_ 2
Ostreococcus_lucimarinus_CCE9901_ 2
Ostreococcus_tauri_ 3
Bathycoccus_prasinos_ 3
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 5
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 2
Thecamonas_trahens_ATCC_50062_ 4
Bigelowiella_natans_CCMP2755_22 3
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 7
Leishmania_major_strain_Friedlin_ 7
Leishmania_infantum_JPCM5_2.4 7
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 6
Trypanosoma_vivax_ 4
Trypanosoma_cruzi_strain_CL_Brener 4
Trypanosoma_congolense_2.4 6
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 4
Ectocarpus_siliculosus 5
Aureococcus_anophagefferens_ 1
Albugo_laibachii_22 2
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 5
Pythium_ultimum_v1.7-2 2
Pythium_aphanidermatum_DAOM_BR444_22 4
Pythium_irregulare_DAOM_BR486_22 2
Pythium_vexans_DAOM_BR484_22 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   3
Phytophthora_sojae_1.1 4
Phytophthora_infestans_T30-4_ 3
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 3
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 3
Thalassiosira_pseudonana_CCMP1335 2
Perkinsus_marinus_ATCC_50983_ 2
Paramecium_tetraurelia_ 9
Tetrahymena_thermophila_SB210_1_ 2
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 3
Cryptosporidium_muris 2
Cryptosporidium_parvum_Iowa_II 3
Neospora_caninum 2
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 2
Babesia_bovis_T2Bo_ 2
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 2
Naegleria_gruberi_ 8
Trichomonas_vaginalis_ 2
Guillardia_theta_CCMP2712_v1.0_ 2
Emiliania_huxleyi_CCMP1516_ 3
Thermobifida_fusca_YX 0
Kitasatospora_setae_KM-6054 1
Shewanella_pealeana_ATCC_700345 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   5
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   6
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3
Cryptococcus_neoformans_var._grubii_H99_ 4
Cryptococcus_neoformans_B-3501A_ 4
Cryptococcus_neoformans_JEC21_ 4
Paracoccidioides_brasiliensis_Pb01_ 4
Paracoccidioides_brasiliensis_Pb03_ 3
Coccidioides_posadasii_str._Silveira_ 4
Coccidioides_immitis_RMSCC_3703_ 3
Coccidioides_immitis_RMSCC_2394_ 5
Coccidioides_immitis_H538.4_ 3
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 3
Histoplasma_capsulatum_H88 4
Histoplasma_capsulatum_G186AR 3
Aspergillus_fumigatus_A1163_ 5
Candida_albicans_WO-1_ 3
Saccharomyces_cerevisiae_UC5 2
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CLIB324 2
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 2
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 2
Saccharomyces_cerevisiae_LalvinQA23 2
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 2
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 2
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 2
Saccharomyces_cerevisiae_Y10 0
Saccharomyces_cerevisiae_YJM789_ 2
Saccharomyces_cerevisiae_YJM789 2
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2
Schizosaccharomyces_pombe_972h-_ 5
Batrachochytrium_dendrobatidis_JEL423_ 2
Batrachochytrium_dendrobatidis_JAM81_ 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4
Hordeum_vulgare_22   (Domesticated barley)   16
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4
Trypanosoma_brucei_Lister_427_v4.1 4
Neospora_caninum_Nc-Liverpool_6.2 2
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1
Serratia_marcescens_FGI94 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   5
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   2
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2
Arabidopsis_thaliana_10   (Thale cress)   3

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   5
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Moniliophthora_perniciosa_FA553__(Genome_survey) 2
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   9
Ricinus_communis__(Early_assembly)   (Castor bean)   5
Nicotiana_benthamiana_0.4.4_(Early_draft) 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
Core_Eukaryotic_Genes_458_(CEGMA) 6
TargetDB__(Targets) 15
Protozoadb_2010_08_(Protozoadb) 82
STRING_v9.0.5_(STRING) 292
NCBI_2017_08_genome 2509
Uniprot_2018_03_genome 23350
Protein_Data_Bank_(all_PDB_sequenc) 10

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