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Domain combinations for _gap_,52172,109604 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52172 - CheY-like
109604 - HD-domain/PDEase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Phycomyces_blakesleeanus_ 0
Rhizomucor_miehei_CAU432_ 0
Aspergillus_fumigatus_Af293 0
Aspergillus_nidulans_FGSC_A4_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_clavatus_NRRL_1_ 0
Cyanothece_sp._PCC_8802 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 1
Oscillibacter_valericigenes_Sjm18-20 0
Clostridium_sticklandii_DSM_519 1
Clostridium_phytofermentans_ISDg 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Rhodothermus_marinus_DSM_4252 1
Isosphaera_pallida_ATCC_43644 1
Rhodopirellula_baltica_SH_1 1
Turneriella_parva_DSM_21527 1
Treponema_azotonutricium_ZAS-9 1
Desulfurispirillum_indicum_S5 1
Marinitoga_piezophila_KA3 1
Kosmotoga_olearia_TBF_19.5.1 1
Fervidobacterium_pennivorans_DSM_9078 1
Fervidobacterium_nodosum_Rt17-B1 1
Candidatus_Koribacter_versatilis_Ellin345 1
Candidatus_Nitrospira_defluvii 1
Sulfuricurvum_kujiense_DSM_16994 0
Desulfomonile_tiedjei_DSM_6799 2
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfomicrobium_baculatum_DSM_4028 4
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 1
Desulfovibrio_magneticus_RS-1 2
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_salexigens_DSM_2638 2
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 1
Pelobacter_propionicus_DSM_2379 1
Anaeromyxobacter_sp._Fw109-5 1
Dechloromonas_aromatica_RCB 1
Azoarcus_sp._KH32C 1
Dechlorosoma_suillum_PS 2
Pseudogulbenkiania_sp._NH8B 1
Burkholderia_thailandensis_E264 2
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_vietnamiensis_G4 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Herbaspirillum_seropedicae_SmR1 1
Sideroxydans_lithotrophicus_ES-1 1
Rhodospirillum_photometricum_DSM_122 1
Magnetospirillum_magneticum_AMB-1 2
Azospirillum_lipoferum_4B 2
Azospirillum_sp._B510 2
Azospirillum_brasilense_Sp245 1
Methylobacterium_chloromethanicum_CM4 1
Saccharophagus_degradans_2-40 1
Aeromonas_veronii_B565 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2
Vibrio_anguillarum_775 2
Vibrio_vulnificus_MO6-24/O 1
Vibrio_cholerae_O395 2
Idiomarina_loihiensis_L2TR 1
Shewanella_loihica_PV-4 1
Shewanella_denitrificans_OS217 2
Shewanella_baltica_OS185 2
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_violacea_DSS12 1
Pseudoalteromonas_sp._SM9913 1
Marinobacter_sp._BSs20148 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 1
Marinomonas_posidonica_IVIA-Po-181 1
Marinomonas_mediterranea_MMB-1 1
Pseudoxanthomonas_spadix_BD-a59 1
Stenotrophomonas_maltophilia_K279a 1
Xylella_fastidiosa_M23 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Allochromatium_vinosum_DSM_180 2
Thiocystis_violascens_DSM_198 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Methylophaga_sp._JAM1 1

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Strains
Genome     Number
Coccidioides_immitis_H538.4_ 1
Aspergillus_fumigatus_A1163_ 0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Chthonomonas_calidirosea_T49 1
Clostridium_thermocellum_DSM_1313 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Rhodothermus_marinus_SG0.5JP17-172 1
Leptospirillum_ferriphilum_ML-04 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Desulfovibrio_vulgaris_str._Hildenborough 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Burkholderia_phenoliruptrix_BR3459a 1
Ralstonia_solanacearum_PSI07 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 3
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 2
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 2
Sulfuricella_denitrificans_skB26 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 2
Rhodopseudomonas_palustris_CGA009 1
Aeromonas_hydrophila_ML09-119 1
Vibrio_anguillarum_Listonella_anguillarum_M3 2
Vibrio_nigripulchritudo_VibrioScope 1
Vibrio_vulnificus_CMCP6 1
Vibrio_vulnificus_YJ016 1
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 2
Vibrio_cholerae_O395 2
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 2
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Idiomarina_loihiensis_GSL_199 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 2
Shewanella_baltica_OS678 2
Shewanella_baltica_OS117 2
Shewanella_baltica_OS223 2
Shewanella_baltica_OS195 2
Shewanella_baltica_OS155 3
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_M12 1
Xylella_fastidiosa_Temecula1 1
Xylella_fastidiosa_9a5c 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Methylophaga_sp._JAM7 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 4
TargetDB__(Targets) 3
STRING_v9.0.5_(STRING) 118
Uniprot_2018_03_genome 10770
NCBI_2017_08_genome 7433

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