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Domain combinations for _gap_,52540,_gap_,47031,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
47031 - Second domain of FERM

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   1
Rattus_norvegicus_76_5.0   (Norway rat)   3
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Tupaia_belangeri_76   (Northern tree shrew)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Albugo_laibachii_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Tetrahymena_thermophila_SB210_1_ 2

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1

Longest transcript per gene
Genome     Number
Macaca_mulatta_69_1   (Rhesus monkey)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Tupaia_belangeri_69   (Northern tree shrew)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 9
NCBI_2017_08_genome 27
Uniprot_2018_03_genome 520

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