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Domain combinations for _gap_,52540,_gap_,54236,47031,_gap_,50044,_gap_,54236,47031,50729 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
54236 - Ubiquitin-like
47031 - Second domain of FERM
50044 - SH3-domain
54236 - Ubiquitin-like
47031 - Second domain of FERM
50729 - PH domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   3
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Gadus_morhua_76_1   (Atlantic cod)   2
Adineta_vaga 3
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Helobdella_robusta_ 2
Capitella_sp._I_ 1
Nasonia_vitripennis_   (Jewel wasp)   1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 1
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Amphimedon_queenslandica 1
Trichoplax_adhaerens_ 1
Proterospongia_sp._ATCC_50818_ 1
Dictyostelium_discoideum 1

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Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Gadus_morhua_69_1   (Atlantic cod)   2

Others
Genome     Number
STRING_v9.0.5_(STRING) 8
Uniprot_2018_03_genome 7888
NCBI_2017_08_genome 179

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