SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,52540,_gap_,54236,_gap_,54236,47031,50729 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
54236 - Ubiquitin-like
54236 - Ubiquitin-like
47031 - Second domain of FERM
50729 - PH domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Erinaceus_europaeus_76   (Western European hedgehog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Gadus_morhua_76_1   (Atlantic cod)   1

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   1

Others
Genome     Number
Uniprot_2018_03_genome 32

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