SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,53187,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53187 - Zn-dependent exopeptidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   21
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_76_3.1   (Western gorilla)   10
Pongo_abelii_76_2   (Sumatran orangutan)   7
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   7
Papio_anubis_76   (Olive baboon)   6
Macaca_mulatta_76_1   (Rhesus monkey)   7
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   14
Otolemur_garnettii_76_3   (Small-eared galago)   5
Microcebus_murinus_76_1   (Gray mouse lemur)   5
Rattus_norvegicus_76_5.0   (Norway rat)   12
Mus_musculus_76_38   (House mouse)   23
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   5
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   8
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   5
Cavia_porcellus_76_3   (Domestic guinea pig)   8
Oryctolagus_cuniculus_76_2   (Rabbit)   7
Ochotona_princeps_76   (American pika)   7
Tupaia_belangeri_76   (Northern tree shrew)   4
Sus_scrofa_76_10.2   (Pig)   7
Bos_taurus_76_3.1   (Cattle)   7
Ovis_aries_76_3.1   (Sheep)   6
Vicugna_pacos_76_1   (Alpaca)   3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_76_1   (Giant panda)   6
Canis_familiaris_76_3.1   (Dog)   8
Felis_catus_76_6.2   (Domestic cat)   5
Equus_caballus_76_2   (Horse)   6
Myotis_lucifugus_76_2.0   (Little brown bat)   3
Pteropus_vampyrus_76_1   (Large flying fox)   6
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   6
Procavia_capensis_76_1   (Cape rock hyrax)   7
Loxodonta_africana_76_3   (African savanna elephant)   10
Echinops_telfairi_76   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_76_1.0   (Tammar wallaby)   7
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   6
Ornithorhynchus_anatinus_76_5   (Platypus)   6
Saccoglossus_kowalevskii_v3.0 15
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   5
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   4
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7
Anolis_carolinensis_76_2.0   (Green anole)   6
Xenopus_laevis_   (African clawed frog)   13
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   6
Latimeria_chalumnae_76_1   (Coelacanth)   8
Lepisosteus_oculatus_76   (Spotted gar)   9
Gadus_morhua_76_1   (Atlantic cod)   4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5
Takifugu_rubripes_76_4   (Torafugu)   10
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   6
Oryzias_latipes_76_1   (Japanese medaka)   5
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   7
Poecilia_formosa_76   (Amazon molly)   5
Oreochromis_niloticus_76_1.0   (Nile tilapia)   9
Astyanax_mexicanus_76   (Mexican tetra)   5
Danio_rerio_76_9   (Zebrafish)   10
Oikopleura_dioica 7
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3
Ciona_intestinalis_76   (Vase tunicate)   5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   7
Adineta_vaga 18
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   5
Lottia_gigantea_   (Owl limpet)   8
Helobdella_robusta_ 8
Capitella_sp._I_ 7
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7
Heliconius_melpomene_   (Postman butterfly)   3
Nasonia_vitripennis_   (Jewel wasp)   6
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   7
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4
Linepithema_humile_v1.1   (Argentine ant)   5
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   5
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5
Atta_cephalotes_v1.1 6
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5
Lucilia_cuprina   (Australian sheep blowfly)   6
Drosophila_grimshawi_1.3 15
Drosophila_willistoni_1.3 15
Drosophila_pseudoobscura_2.13 19
Drosophila_persimilis_1.3 18
Drosophila_suzukii 5
Drosophila_yakuba_1.3 15
Drosophila_simulans_1.3 9
Drosophila_sechellia_1.3 13
Drosophila_melanogaster_76_5   (Fruit fly)   32
Drosophila_erecta_1.3 12
Drosophila_ananassae_1.3 19
Drosophila_virilis_1.2 14
Drosophila_mojavensis_1.3 14
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   9
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   10
Anopheles_darlingi_22   (American malaria mosquito)   4
Anopheles_gambiae_49_3j   (African malaria mosquito)   8
Tribolium_castaneum_3.0   (Red flour beetle)   7
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   5
Acyrthosiphon_pisum_   (Pea aphid)   3
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   8
Strigamia_maritima_22 4
Sarcoptes_scabiei 3
Tetranychus_urticae_   (Two-spotted spider mite)   4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   4
Meloidogyne_hapla_ 3
Onchocerca_volvulus_22 4
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   4
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 6
Caenorhabditis_remanei_ 5
Caenorhabditis_elegans_76_235   (Roundworm)   7
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 3
Hymenolepis_microstoma_ 3
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 4
Taenia_solium_   (Pork tapeworm)   2
Schistosoma_mansoni_ 4
Mnemiopsis_leidyi   (Sea walnut)   4
Acropora_digitifera_v1.0 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   6
Hydra_vulgaris 1
Amphimedon_queenslandica 4
Trichoplax_adhaerens_ 6
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 3
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 3
Conidiobolus_coronatus_NRRL28638_v1.0 3
Mortierella_verticillata_NRRL_6337_ 9
Phycomyces_blakesleeanus_ 5
Rhizopus_oryzae_RA_99-880_ 2
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 3
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 3
Ustilago_maydis_ 3
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Microbotryum_violaceum_22 4
Sphaerobolus_stellatus_v1.0 1
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 3
Coniophora_puteana 2
Hydnomerulius_pinastri_v2.0 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 3
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 3
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   2
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1
Galerina_marginata_v1.0 2
Hebeloma_cylindrosporum_h7_v2.0 3
Laccaria_bicolor_S238N-H82_ 2
Agaricus_bisporus_var._bisporus_ 5
Schizophyllum_commune_ 2
Stereum_hirsutum_FP-91666_SS1__v1.0 3
Heterobasidion_annosum_ 2
Gloeophyllum_trabeumv1.0 2
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 3
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 2
Postia_placenta_ 4
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Dichomitus_squalens 1
Trametes_versicolor_v1.0 3
Tremella_mesenterica_   (Witches' butter)   2
Daldinia_eschscholzii_EC12_v1.0 4
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 8
Magnaporthe_grisea_70-15_ 6
Podospora_anserina_ 2
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 4
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 7
Verticillium_dahliae_VdLs.17_ 10
Acremonium_alcalophilumv_1.0 4
Glomerella_graminicola_22 6
Fusarium_graminearum_ 7
Nectria_haematococca_mpVI_ 4
Fusarium_oxysporum_f._sp._lycopersici_4286_ 5
Fusarium_verticillioides_7600_ 6
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 4
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 4
Trichoderma_virens_Gv29-8_ 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   2
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 2
Blumeria_graminis_22 2
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 5
Setosphaeria_turcica_v1.0 5
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 4
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2
Alternaria_brassicicola_ 4
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 4
Pyrenophora_tritici-repentis_ 4
Stagonospora_nodorum_ 3
Mycosphaerella_graminicola_IPO323_ 5
Zasmidium_cellare_ATCC_36951_v1.0 3
Dothistroma_septosporum 4
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 4
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3
Microsporum_canis_CBS_113480_ 4
Trichophyton_equinum_CBS_127.97_ 5
Trichophyton_verrucosum_HKI_0517_ 3
Arthroderma_benhamiae_CBS_112371_ 3
Trichophyton_tonsurans_CBS_112818_ 4
Trichophyton_rubrum_CBS_118892_ 4
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 2
Aspergillus_fumigatus_Af293 2
Aspergillus_brasiliensis_v1.0 2
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 4
Aspergillus_versicolor_v1.0 2
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 2
Neosartorya_fischeri_NRRL_181_ 2
Aspergillus_terreus_NIH2624_ 4
Aspergillus_tubingensis_v1.0 2
Aspergillus_wentii_v1.0 2
Aspergillus_oryzae_RIB40_ 2
Aspergillus_niger_22 3
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 3
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Hansenula_polymorpha_v2.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 2
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 2
Ashbya_gossypii_ATCC_10895_ 3
Saccharomyces_mikatae_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 2
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 2
Allomyces_macrogynus_ATCC_38327_ 6
Spizellomyces_punctatus_DAOM_BR117_ 6
Dictyostelium_discoideum 3
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 6
Eucalyptus_grandis_v201   (Rose gum)   10
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4
Gossypium_raimondii_v221 14
Citrus_clementina_v165 8
Citrus_sinensis_v154   (Sweet orange)   15
Thellungiella_halophila_v173 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   7
Capsella_rubella_v183 4
Arabidopsis_lyrata_   (Lyrate rockcress)   5
Arabidopsis_thaliana_10   (Thale cress)   7
Carica_papaya_   (Papaya)   5
Medicago_truncatula_   (Barrel medic)   9
Phaseolus_vulgaris_v186   (French bean)   4
Glycine_max_v109   (Soybean)   4
Cucumis_sativus_v122   (Cucumber)   5
Fragaria_vesca_   (Wild strawberry)   4
Malus_domestica_v196   (Apple)   5
Prunus_persica_v139   (Peach)   6
Linum_usitatissimum_v200   (Flax)   7
Manihot_esculenta_v147   (Cassava)   2
Populus_trichocarpa_v156   (Black cottonwood)   4
Vitis_vinifera_   (Wine grape)   5
Mimulus_guttatus_v140   (Spotted monkey flower)   6
Solanum_lycopersicum_v.2.3   (Tomato)   5
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 18
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   5
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   7
Oryza_barthii_22   (African wild rice)   5
Oryza_meridionalis_22 3
Oryza_glumaepatula_22 5
Oryza_glaberrima   (African rice)   3
Oryza_punctata_22 4
Oryza_nivara_22 7
Oryza_brachyantha_22   (Malo sina)   4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   7
Oryza_sativa_v193   (Rice)   7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   5
Zea_mays_subsp._mays_   (Maize)   10
Zea_mays_v181   (Maize)   10
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   4
Amborella_trichopoda_22 4
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 2
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 7
Volvox_carteri_v199 6
Chlamydomonas_reinhardtii_4.0 5
Ostreococcus_sp._RCC809_ 1
Ostreococcus_tauri_ 1
Bathycoccus_prasinos_ 5
Micromonas_sp._RCC299_ 4
Micromonas_pusilla_CCMP1545_v3.0 4
Cyanidioschyzon_merolae_strain_10D_22 5
Cyanidioschyzon_merolae 5
Porphyridium_purpureum_02_2012 5
Thecamonas_trahens_ATCC_50062_ 6
Bigelowiella_natans_CCMP2755_22 8
Giardia_lamblia_2.3 4
Leishmania_mexicana_2.4 5
Leishmania_major_strain_Friedlin_ 7
Leishmania_infantum_JPCM5_2.4 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 5
Trypanosoma_vivax_ 4
Trypanosoma_cruzi_strain_CL_Brener 5
Trypanosoma_congolense_2.4 5
Trypanosoma_brucei_gambiense_v4.1 6
Trypanosoma_brucei_TREU927_v4.1 6
Ectocarpus_siliculosus 4
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 8
Pythium_iwayamai_DAOM_BR242034_22 7
Pythium_arrhenomanes_ATCC_12531_22 8
Pythium_ultimum_v1.7-2 5
Pythium_aphanidermatum_DAOM_BR444_22 8
Pythium_irregulare_DAOM_BR486_22 9
Pythium_vexans_DAOM_BR484_22 8
Phytophthora_ramorum_1.1   (Sudden oak death agent)   5
Phytophthora_sojae_1.1 5
Phytophthora_infestans_T30-4_ 5
Phytophthora_capsici_ 2
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 3
Fragilariopsis_cylindrus 9
Thalassiosira_pseudonana_CCMP1335 2
Perkinsus_marinus_ATCC_50983_ 7
Paramecium_tetraurelia_ 41
Tetrahymena_thermophila_SB210_1_ 24
Ichthyophthirius_multifiliis_strain_G5_ 4
Cryptosporidium_hominis 1
Cryptosporidium_muris 2
Cryptosporidium_parvum_Iowa_II 1
Neospora_caninum 4
Toxoplasma_gondii_VEG 4
Toxoplasma_gondii_ME49 5
Toxoplasma_gondii_GT1 5
Babesia_bovis_T2Bo_ 2
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 10
Naegleria_gruberi_ 5
Trichomonas_vaginalis_ 12
Guillardia_theta_CCMP2712_v1.0_ 6
Emiliania_huxleyi_CCMP1516_ 7
Synechocystis_sp._PCC_6803 1
Synechococcus_elongatus_PCC_7942 1
Trichodesmium_erythraeum_IMS101 1
Cyanothece_sp._PCC_8802 1
Microcystis_aeruginosa_NIES-843 1
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 1
Conexibacter_woesei_DSM_14684 1
Cryptobacterium_curtum_DSM_15641 1
Eggerthella_sp._YY7918 1
Eggerthella_lenta_DSM_2243 2
Slackia_heliotrinireducens_DSM_20476 1
Olsenella_uli_DSM_7084 0
Coriobacterium_glomerans_PW2 0
Ilumatobacter_coccineus 1
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Streptosporangium_roseum_DSM_43021 4
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 2
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 2
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 3
Salinispora_arenicola_CNS-205 2
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 4
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 0
Rhodococcus_erythropolis_PR4 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Corynebacterium_urealyticum_DSM_7109 1
Intrasporangium_calvum_DSM_43043 1
Isoptericola_variabilis_225 3
[Cellvibrio]_gilvus_ATCC_13127 1
Renibacterium_salmoninarum_ATCC_33209 1
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2
Anaerolinea_thermophila_UNI-1 1
Thermomicrobium_roseum_DSM_5159 1
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Deinococcus_deserti_VCD115 1
Deinococcus_maricopensis_DSM_21211 1
Deinococcus_proteolyticus_MRP 0
Meiothermus_silvanus_DSM_9946 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1
Ethanoligenens_harbinense_YUAN-3 1
Thermaerobacter_marianensis_DSM_12885 2
butyrate-producing_bacterium_SS3/4 2
Clostridium_sticklandii_DSM_519 1
Eubacterium_rectale_M104/1 1
Roseburia_hominis_A2-183 1
Alkaliphilus_oremlandii_OhILAs 1
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_tetani_E88 1
Clostridium_acetobutylicum_ATCC_824 1
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_uberis_0140J 1
Streptococcus_parauberis_KCTC_11537 1
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_suis_P1/7 1
Streptococcus_sanguinis_SK36 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Brevibacillus_brevis_NBRC_100599 2
Lysinibacillus_sphaericus_C3-41 1
Bacillus_halodurans_C-125 1
Bacillus_pseudofirmus_OF4 2
Bacillus_clausii_KSM-K16 1
Candidatus_Cloacamonas_acidaminovorans 1
Gemmatimonas_aurantiaca_T-27 6
Ignavibacterium_album_JCM_16511 1
Haliscomenobacter_hydrossis_DSM_1100 3
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 2
Salinibacter_ruber_M8 0
Rhodothermus_marinus_DSM_4252 0
Flexibacter_litoralis_DSM_6794 1
Belliella_baltica_DSM_15883 5
Cyclobacterium_marinum_DSM_745 0
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 2
Dyadobacter_fermentans_DSM_18053 0
Spirosoma_linguale_DSM_74 3
Runella_slithyformis_DSM_19594 4
Parabacteroides_distasonis_ATCC_8503 0
Bacteroides_sp._CF50 1
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 0
Lacinutrix_sp._5H-3-7-4 0
Maribacter_sp._HTCC2170 0
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 3
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 0
Cellulophaga_lytica_DSM_7489 0
Polaribacter_sp._MED152 0
Weeksella_virosa_DSM_16922 1
Parachlamydia_acanthamoebae_UV-7 1
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 3
Planctomyces_brasiliensis_DSM_5305 2
Planctomyces_limnophilus_DSM_3776 2
Pirellula_staleyi_DSM_6068 2
Opitutus_terrae_PB90-1 1
Fretibacterium_fastidiosum 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Treponema_primitia_ZAS-2 1
Desulfurispirillum_indicum_S5 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Deferribacter_desulfuricans_SSM1 1
Petrotoga_mobilis_SJ95 1
Mesotoga_prima_MesG1.Ag.4.2 1
Thermotoga_lettingae_TMO 1
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 7
Granulicella_tundricola_MP5ACTX9 3
Granulicella_mallensis_MP5ACTX8 3
Candidatus_Koribacter_versatilis_Ellin345 2
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 2
Acidobacterium_capsulatum_ATCC_51196 1
Candidatus_Nitrospira_defluvii 2
Acidithiobacillus_ferrivorans_SS3 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Bacteriovorax_marinus_SJ 2
Arcobacter_butzleri_RM4018 1
Campylobacter_lari_RM2100 1
Campylobacter_jejuni_subsp._doylei_269.97 1
Campylobacter_sp._03-427 1
Sulfurimonas_autotrophica_DSM_16294 1
Sulfurimonas_denitrificans_DSM_1251 1
Helicobacter_cetorum_MIT_00-7128 1
Desulfarculus_baarsii_DSM_2075 1
Desulfomonile_tiedjei_DSM_6799 2
Desulfotalea_psychrophila_LSv54 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_aespoeensis_Aspo-2 1
Desulfovibrio_magneticus_RS-1 2
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_salexigens_DSM_2638 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_sulfurreducens_KN400 1
Haliangium_ochraceum_DSM_14365 2
Sorangium_cellulosum_'So_ce_56' 1
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 2
Myxococcus_fulvus_HW-1 2
Chromobacterium_violaceum_ATCC_12472 1
Rubrivivax_gelatinosus_IL144 1
Ralstonia_pickettii_12D 1
Alicycliphilus_denitrificans_K601 1
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 1
Collimonas_fungivorans_Ter331 3
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 2
Caulobacter_segnis_ATCC_21756 2
Sphingobium_sp._SYK-6 0
Sphingomonas_wittichii_RW1 0
Maricaulis_maris_MCS10 0
Jannaschia_sp._CCS1 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Paracoccus_denitrificans_PD1222 1
Rhodospirillum_centenum_SW 1
Candidatus_Pelagibacter_sp._IMCC9063 1
Parvibaculum_lavamentivorans_DS-1 1
Ochrobactrum_anthropi_ATCC_49188 1
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 1
Brucella_ovis_ATCC_25840 1
Sinorhizobium_fredii_NGR234 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_sp._H13-3 1
Methylocella_silvestris_BL2 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Rhodomicrobium_vannielii_ATCC_17100 2
Bradyrhizobium_sp._ORS_278 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 1
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_cholerae_O395 1
Idiomarina_loihiensis_L2TR 0
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 2
Shewanella_violacea_DSS12 1
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 1
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_sp._BSs20148 1
Alteromonas_sp._SN2 1
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 1
Alcanivorax_borkumensis_SK2 1
Marinomonas_sp._MWYL1 1
Rhodanobacter_denitrificans 1
Stenotrophomonas_maltophilia_K279a 0
Xanthomonas_axonopodis_pv._citri_str._306 2
Xanthomonas_campestris_pv._campestris_str._B100 2
Alkalilimnicola_ehrlichii_MLHE-1 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
gamma_proteobacterium_HdN1 1
Photorhabdus_asymbiotica 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Pantoea_sp._At-9b 1
Shigella_sonnei_Ss046 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Nitrosopumilus_maritimus_SCM1 1
Acidilobus_saccharovorans_345-15 1
Fervidicoccus_fontis_Kam940 1
Pyrolobus_fumarii_1A 1
Hyperthermus_butylicus_DSM_5456 1
Thermogladius_cellulolyticus_1633 1
Ignisphaera_aggregans_DSM_17230 1
Aeropyrum_pernix_K1 1
Thermosphaera_aggregans_DSM_11486 2
Staphylothermus_hellenicus_DSM_12710 2
Staphylothermus_marinus_F1 3
Desulfurococcus_fermentans_DSM_16532 1
Desulfurococcus_kamchatkensis_1221n 1
Desulfurococcus_mucosus_DSM_2162 2
Acidianus_hospitalis_W1 1
Sulfolobus_tokodaii_str._7 1
Sulfolobus_islandicus_Y.N.15.51 1
Sulfolobus_solfataricus_P2 1
Vulcanisaeta_moutnovskia_768-28 1
Vulcanisaeta_distributa_DSM_14429 1
Pyrobaculum_sp._1860 1
Pyrobaculum_calidifontis_JCM_11548 1
Pyrobaculum_arsenaticum_DSM_13514 1
Pyrobaculum_oguniense_TE7 1
Thermoproteus_neutrophilus_V24Sta 1
Pyrobaculum_islandicum_DSM_4184 1
halophilic_archaeon_DL31 3
Methanosarcina_acetivorans_C2A 1
Methanosarcina_barkeri_str._Fusaro 3
Thermococcus_onnurineus_NA1 1
Thermococcus_kodakarensis_KOD1 1
Thermococcus_gammatolerans_EJ3 1
Thermococcus_sibiricus_MM_739 1
Pyrococcus_sp._ST04 1
Pyrococcus_yayanosii_CH1 1
Pyrococcus_abyssi_GE5 1
Pyrococcus_furiosus_COM1 1
Halopiger_xanaduensis_SH-6 1
Natrinema_sp._J7-2 1
Natrialba_magadii_ATCC_43099 2
Halorubrum_lacusprofundi_ATCC_49239 1
Haloquadratum_walsbyi_DSM_16790 1
Halalkalicoccus_jeotgali_B3 3

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   15
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   24
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   11
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   6
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Paracoccidioides_brasiliensis_Pb01_ 4
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 4
Coccidioides_immitis_RMSCC_3703_ 2
Coccidioides_immitis_RMSCC_2394_ 3
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 3
Histoplasma_capsulatum_G186AR 4
Aspergillus_fumigatus_A1163_ 2
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 3
Batrachochytrium_dendrobatidis_JAM81_ 3
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   6
Hordeum_vulgare_22   (Domesticated barley)   7
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   3
Trypanosoma_brucei_Lister_427_v4.1 6
Neospora_caninum_Nc-Liverpool_6.2 4
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1
Chroococcidiopsis_thermalis_PCC_7203 2
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Synechococcus_elongatus_PCC_6301 1
Prochlorococcus_marinus_str._AS9601 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._PCC_8801 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._EuI1c 1
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Amycolatopsis_mediterranei_RB 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_orientalis_HCCB10007 3
Actinoplanes_friuliensis_DSM_7358 2
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Corynebacterium_urealyticum_DSM_7111 1
Corynebacterium_pseudotuberculosis_FRC41 1
Corynebacterium_pseudotuberculosis_C231 1
Actinomyces_viscosus_C505 1
Chthonomonas_calidirosea_T49 1
Deinococcus_peraridilitoris_DSM_19664 2
Erysipelothrix_rhusiopathiae_SY1027 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_tetani_genome_12124569 1
Clostridium_perfringens_SM101 2
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Halobacteroides_halobius_DSM_5150 1
Streptococcus_anginosus_C1051 1
Streptococcus_oligofermentans_AS_1.3089 1
Streptococcus_iniae_SF1 1
Streptococcus_parasanguinis_FW213 1
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_suis_05ZYH33 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Thermobacillus_composti_KWC4 1
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 1
Bacillus_licheniformis_9945A 0
Staphylococcus_pasteuri_SP1 1
Staphylococcus_lugdunensis_N920143 1
Salinibacter_ruber_DSM_13855 0
Rhodothermus_marinus_SG0.5JP17-172 0
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 0
Nonlabens_dokdonensis_DSW-6 1
Psychroflexus_torquis_ATCC_700755 2
Singulisphaera_acidiphila_DSM_18658 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_RM1221 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1
Campylobacter_jejuni_subsp._jejuni_PT14 1
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1
Campylobacter_coli_76339 1
Campylobacter_coli_15-537360 1
Helicobacter_cetorum_MIT_99-5656 1
Desulfocapsa_sulfexigens_DSM_10523 1
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 2
Desulfovibrio_vulgaris_str._Hildenborough 1
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sulfurreducens_PCA 1
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 2
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_EPS 1
Nitrosomonas_sp._AL212 1
Caulobacter_crescentus_CB15 2
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 1
Paracoccus_aminophilus_JCM_7686 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Brucella_melitensis_bv._1_str._16M 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Hyphomicrobium_denitrificans_1NES1 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Simiduia_agarivorans_SA1_=_DSM_21679 2
Aeromonas_hydrophila_ML09-119 0
Vibrio_nigripulchritudo_VibrioScope 1
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Idiomarina_loihiensis_GSL_199 0
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'English_Channel_615' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Alcanivorax_dieselolei_B5 1
Thalassolituus_oleivorans_MIL-1 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Shigella_sonnei_53G 1
Shigella_boydii_Sb227 1
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 1
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_CFT073 1
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_calcoaceticus_ruh2202 1
Caldisphaera_lagunensis_DSM_15908 1
Aeropyrum_camini_SY1_=_JCM_12091 1
Sulfolobus_islandicus_LAL14/1 1
Sulfolobus_islandicus_REY15A 1
Sulfolobus_islandicus_HVE10/4 1
Sulfolobus_islandicus_Y.G.57.14 1
Sulfolobus_islandicus_L.S.2.15 1
Sulfolobus_islandicus_M.16.27 1
Sulfolobus_islandicus_M.14.25 1
Sulfolobus_islandicus_M.16.4 1
Sulfolobus_islandicus_L.D.8.5 1
Sulfolobus_solfataricus_98/2 1
Thermococcus_sp._AM4 1
Thermococcus_sp._CL1 1
Pyrococcus_sp._NA2 1
Pyrococcus_furiosus_DSM_3638 1
Halovivax_ruber_XH-70 1
Natronococcus_occultus_SP4 2
Natronobacterium_gregoryi_SP2 1
Haloquadratum_walsbyi_C23 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   8
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_69_3.1   (Western gorilla)   7
Pongo_abelii_69_2   (Sumatran orangutan)   7
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   6
Macaca_mulatta_69_1   (Rhesus monkey)   6
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_69_3   (Small-eared galago)   5
Microcebus_murinus_69_1   (Gray mouse lemur)   5
Rattus_norvegicus_69_3.4   (Norway rat)   7
Mus_musculus_69_38   (House mouse)   8
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   5
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8
Cavia_porcellus_69_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_69_2   (Rabbit)   5
Ochotona_princeps_69   (American pika)   7
Tupaia_belangeri_69   (Northern tree shrew)   4
Sus_scrofa_69_10.2   (Pig)   6
Bos_taurus_69_3.1   (Cattle)   6
Vicugna_pacos_69_1   (Alpaca)   3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_69_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_69_1   (Giant panda)   6
Canis_familiaris_69_3.1   (Dog)   7
Felis_catus_69   (Domestic cat)   7
Equus_caballus_69_2   (Horse)   6
Myotis_lucifugus_69_2.0   (Little brown bat)   3
Pteropus_vampyrus_69_1   (Large flying fox)   6
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   6
Procavia_capensis_69_1   (Cape rock hyrax)   7
Loxodonta_africana_69_3   (African savanna elephant)   5
Echinops_telfairi_69   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   5
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_69_1.0   (Tammar wallaby)   7
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   6
Ornithorhynchus_anatinus_69_5   (Platypus)   4
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   5
Gallus_gallus_69_2   (Chicken)   6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   4
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   5
Latimeria_chalumnae_69_1   (Coelacanth)   7
Gadus_morhua_69_1   (Atlantic cod)   4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   5
Takifugu_rubripes_69_4   (Torafugu)   5
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   4
Oryzias_latipes_69_1   (Japanese medaka)   5
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   7
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7
Danio_rerio_69_9   (Zebrafish)   7
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   3
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   17
Caenorhabditis_elegans_69_215   (Roundworm)   4
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   4

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   25
Homo_sapiens__(NCBI_version)   (Human)   11
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   8
Loa_loa_v3.3_(Request)   (Eye worm)   5
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   5
Ricinus_communis__(Early_assembly)   (Castor bean)   5
Nicotiana_benthamiana_0.4.4_(Early_draft) 5
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   5
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 14
Protozoadb_2010_08_(Protozoadb) 100
STRING_v9.0.5_(STRING) 835
Uniprot_2018_03_genome 66720
NCBI_2017_08_genome 28075
Protein_Data_Bank_(all_PDB_sequenc) 8
NCBI_viral_sequences_(Viral) 4
TargetDB__(Targets) 21

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