SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54060 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54060 - His-Me finger endonucleases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   2
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 0
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   4
Anolis_carolinensis_76_2.0   (Green anole)   2
Xenopus_laevis_   (African clawed frog)   4
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   10
Latimeria_chalumnae_76_1   (Coelacanth)   9
Lepisosteus_oculatus_76   (Spotted gar)   11
Gadus_morhua_76_1   (Atlantic cod)   17
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   6
Takifugu_rubripes_76_4   (Torafugu)   11
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8
Oryzias_latipes_76_1   (Japanese medaka)   8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   10
Poecilia_formosa_76   (Amazon molly)   11
Oreochromis_niloticus_76_1.0   (Nile tilapia)   24
Astyanax_mexicanus_76   (Mexican tetra)   15
Danio_rerio_76_9   (Zebrafish)   16
Oikopleura_dioica 4
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 0
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3
Heliconius_melpomene_   (Postman butterfly)   1
Bombyx_mori_   (Domestic silkworm)   2
Nasonia_vitripennis_   (Jewel wasp)   3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   7
Drosophila_grimshawi_1.3 15
Drosophila_willistoni_1.3 10
Drosophila_pseudoobscura_2.13 10
Drosophila_persimilis_1.3 11
Drosophila_suzukii 5
Drosophila_yakuba_1.3 10
Drosophila_simulans_1.3 10
Drosophila_sechellia_1.3 11
Drosophila_melanogaster_76_5   (Fruit fly)   11
Drosophila_erecta_1.3 12
Drosophila_ananassae_1.3 8
Drosophila_virilis_1.2 8
Drosophila_mojavensis_1.3 8
Megaselia_scalaris_22 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   11
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   12
Anopheles_darlingi_22   (American malaria mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   9
Tribolium_castaneum_3.0   (Red flour beetle)   4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   8
Strigamia_maritima_22 20
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 2
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   2
Acropora_digitifera_v1.0 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 7
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 1
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 1
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 2
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 1
Rhizopus_oryzae_RA_99-880_ 2
Mucor_circinelloides_ 2
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 1
Chaetomium_globosum_CBS_148.51_ 1
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 0
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 1
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 1
Eucalyptus_grandis_v201   (Rose gum)   2
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   1
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   1
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_aestivum_22   (Bread wheat)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_glumaepatula_22 0
Oryza_punctata_22 0
Oryza_nivara_22 0
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 4
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 1
Cyanophora_paradoxa_ 0
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 0
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 0
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 0
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 336
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Acaryochloris_marina_MBIC11017 1
Trichodesmium_erythraeum_IMS101 1
Cyanothece_sp._PCC_8802 0
Gloeobacter_violaceus_PCC_7421 2
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 2
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 3
Nostoc_sp._PCC_7524 1
Mycoplasma_crocodyli_MP145 1
Mycoplasma_bovis_HB0801 1
Mycoplasma_fermentans_M64 1
Mycoplasma_arthritidis_158L3-1 0
Mycoplasma_agalactiae_PG2 1
Modestobacter_marinus 1
Blastococcus_saxobsidens_DD2 1
Kineococcus_radiotolerans_SRS30216 0
Streptomyces_coelicolor_A3(2) 4
Streptomyces_griseus_subsp._griseus_NBRC_13350 4
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 3
Streptomyces_scabiei_87.22 0
Actinosynnema_mirum_DSM_43827 1
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 2
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Mycobacterium_chubuense_NBB4 0
Microbacterium_testaceum_StLB037 1
Arthrobacter_phenanthrenivorans_Sphe3 0
Herpetosiphon_aurantiacus_DSM_785 1
Chloroflexus_aggregans_DSM_9485 0
Deinococcus_gobiensis_I-0 0
Deinococcus_proteolyticus_MRP 3
Eubacterium_rectale_ATCC_33656 1
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_sp._BNL1100 0
Clostridium_cellulovorans_743B 1
Exiguobacterium_sp._MH3 1
Exiguobacterium_sibiricum_255-15 1
Paenibacillus_polymyxa_M1 0
Solibacillus_silvestris_StLB046 1
Geobacillus_thermoglucosidasius_C56-YS93 1
Oceanobacillus_iheyensis_HTE831 1
Anoxybacillus_flavithermus_WK1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._GHH01 1
Geobacillus_sp._WCH70 1
Geobacillus_thermodenitrificans_NG80-2 1
Halobacillus_halophilus_DSM_2266 1
Bacillus_sp._JS 1
Bacillus_amyloliquefaciens_FZB42 1
Bacillus_atrophaeus_1942 1
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 2
Bacillus_cereus_03BB102 2
Bacillus_anthracis_str._A0248 1
Bacillus_pumilus_SAFR-032 1
Bacillus_megaterium_DSM_319 2
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Chloroherpeton_thalassium_ATCC_35110 1
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 2
Flexibacter_litoralis_DSM_6794 0
Fibrella_aestuarina 3
Spirosoma_linguale_DSM_74 3
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 1
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 2
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 1
Porphyromonas_asaccharolytica_DSM_20707 2
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 2
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 3
Bacteroides_fragilis_YCH46 1
Solitalea_canadensis_DSM_3403 1
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 0
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 2
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 2
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_lytica_DSM_7489 2
Flavobacteriaceae_bacterium_3519-10 0
Capnocytophaga_ochracea_DSM_7271 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 1
Flavobacterium_johnsoniae_UW101 1
Parachlamydia_acanthamoebae_UV-7 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 1
Turneriella_parva_DSM_21527 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Borrelia_garinii_PBi 1
Borrelia_bissettii_DN127 1
Borrelia_afzelii_PKo 1
Borrelia_recurrentis_A1 1
Borrelia_duttonii_Ly 1
Borrelia_crocidurae_str._Achema 1
Borrelia_turicatae_91E135 1
Borrelia_hermsii_DAH 1
Sphaerochaeta_pleomorpha_str._Grapes 0
Sphaerochaeta_globus_str._Buddy 0
Sphaerochaeta_coccoides_DSM_17374 0
Treponema_brennaborense_DSM_12168 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 0
Bacteriovorax_marinus_SJ 4
Bdellovibrio_bacteriovorus_HD100 2
Sulfurospirillum_deleyianum_DSM_6946 1
Sulfurospirillum_barnesii_SES-3 1
Helicobacter_felis_ATCC_49179 1
Helicobacter_pylori_B38 1
Desulfobacterium_autotrophicum_HRM2 1
Lawsonia_intracellularis_PHE/MN1-00 1
Geobacter_sp._M21 1
Geobacter_lovleyi_SZ 1
Geobacter_bemidjiensis_Bem 1
Pelobacter_propionicus_DSM_2379 2
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 1
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Aromatoleum_aromaticum_EbN1 2
Pseudogulbenkiania_sp._NH8B 3
Laribacter_hongkongensis_HLHK9 1
Neisseria_meningitidis_alpha14 1
Leptothrix_cholodnii_SP-6 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_vietnamiensis_G4 0
Alicycliphilus_denitrificans_K601 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 2
Polaromonas_naphthalenivorans_CJ2 6
Rhodoferax_ferrireducens_T118 2
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 2
Herbaspirillum_seropedicae_SmR1 0
Taylorella_equigenitalis_MCE9 1
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 1
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 1
Nitrosomonas_eutropha_C91 0
Gallionella_capsiferriformans_ES-2 1
Caulobacter_crescentus_NA1000 0
Sphingomonas_sp._MM-1 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 0
Paracoccus_denitrificans_PD1222 1
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_rubrum_F11 0
Azospirillum_brasilense_Sp245 0
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconobacter_oxydans_621H 1
Acetobacter_pasteurianus_IFO_3283-01 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 3
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 0
Methylobacterium_radiotolerans_JCM_2831 0
Sinorhizobium_fredii_NGR234 0
Methylocella_silvestris_BL2 0
Rhodomicrobium_vannielii_ATCC_17100 1
Rhodopseudomonas_palustris_BisA53 0
Methylocystis_sp._SC2 0
Teredinibacter_turnerae_T7901 1
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_anguillarum_775 1
Vibrio_vulnificus_MO6-24/O 0
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 1
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_denitrificans_OS217 1
Shewanella_woodyi_ATCC_51908 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 1
Glaciecola_sp._4H-3-7+YE-5 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Hahella_chejuensis_KCTC_2396 0
Marinomonas_mediterranea_MMB-1 0
Chromohalobacter_salexigens_DSM_3043 1
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 1
Methylococcus_capsulatus_str._Bath 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 0
Stenotrophomonas_maltophilia_K279a 0
Xanthomonas_axonopodis_pv._citri_str._306 2
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_campestris_pv._campestris_str._B100 0
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
gamma_proteobacterium_HdN1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Providencia_stuartii_MRSN_2154 0
Yersinia_pseudotuberculosis_IP_31758 3
Yersinia_pestis_Pestoides_F 2
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Pantoea_ananatis_LMG_20103 0
Candidatus_Riesia_pediculicola_USDA 1
Salmonella_bongori_NCTC_12419 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Pseudomonas_sp._TKP 3
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_fluorescens_SBW25 2
Pseudomonas_aeruginosa_UCBPP-PA14 1
Psychrobacter_sp._G 1
Psychrobacter_sp._PRwf-1 0
Psychrobacter_arcticus_273-4 1
Psychrobacter_cryohalolentis_K5 1
Moraxella_catarrhalis_RH4 1
Acinetobacter_oleivorans_DR1 0
Acinetobacter_calcoaceticus_PHEA-2 0
Acinetobacter_baumannii_ATCC_17978 0
Acinetobacter_sp._ADP1 0
Thiomicrospira_crunogena_XCL-2 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1
Francisella_sp._TX077308 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1
Francisella_cf._novicida_3523 1
Francisella_novicida_U112 1
Methanosarcina_acetivorans_C2A 0
Methanosarcina_barkeri_str._Fusaro 0
Acholeplasma_laidlawii_PG-8A 4

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   14
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   10
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   9
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 1
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_CLIB382 0
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 1
Batrachochytrium_dendrobatidis_JAM81_ 0
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Chamaesiphon_minutus_PCC_6605 1
Synechococcus_sp._PCC_7002 1
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 2
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._ATCC_51142 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Stanieria_cyanosphaera_PCC_7437 0
Cylindrospermum_stagnale_PCC_7417 2
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_cynos_C142 1
Mycoplasma_bovis_Hubei-1 1
Mycoplasma_bovis_PG45 1
Mycoplasma_fermentans_JER 1
Mycoplasma_fermentans_PG18 1
Mycoplasma_agalactiae 1
Frankia_sp._EuI1c 0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_erythropolis_CCM2595 1
Deinococcus_peraridilitoris_DSM_19664 1
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_botulinum_E3_str._Alaska_E43 1
Exiguobacterium_antarcticum_B7 1
Paenibacillus_polymyxa_E681 0
Geobacillus_sp._C56-T3 1
Geobacillus_sp._Y4.1MC1 2
Geobacillus_sp._Y412MC52 1
Geobacillus_sp._Y412MC61 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_CC178 1
Bacillus_amyloliquefaciens_Y2 2
Bacillus_amyloliquefaciens_IT-45 1
Bacillus_amyloliquefaciens_XH7 2
Bacillus_amyloliquefaciens_LL3 1
Bacillus_amyloliquefaciens_TA208 2
Bacillus_amyloliquefaciens_DSM_7 1
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_infantis_NRRL_B-14911 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_toyonensis_BCT-7112 1
Bacillus_thuringiensis_HD-771 3
Bacillus_thuringiensis_HD-789 2
Bacillus_thuringiensis_MC28 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 2
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_BMB171 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 2
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_B4264 1
Bacillus_cereus_G9842 3
Bacillus_cereus_F837/76 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Bacillus_megaterium_WSH-002 2
Bacillus_megaterium_QM_B1551 2
Emticicia_oligotrophica_DSM_17448 2
Prevotella_sp._oral_taxon_299_str._F0039 2
Prevotella_dentalis_DSM_3688 2
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 4
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 1
Psychroflexus_torquis_ATCC_700755 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Borrelia_garinii_NMJW1 1
Borrelia_garinii_BgVir 1
Borrelia_afzelii_HLJ01 1
Borrelia_afzelii_PKo 1
Borrelia_burgdorferi_JD1 1
Borrelia_burgdorferi_N40 1
Borrelia_burgdorferi_ZS7 1
Bdellovibrio_exovorus_JSS 1
Bdellovibrio_bacteriovorus_str._Tiberius 2
Arcobacter_butzleri_ED-1 0
Helicobacter_pylori_BM012S 1
Helicobacter_pylori_BM012A 1
Helicobacter_pylori_SouthAfrica20 1
Helicobacter_pylori_UM066 1
Helicobacter_pylori_UM037 1
Helicobacter_pylori_OK113 1
Helicobacter_pylori_HUP-B14 1
Helicobacter_pylori_PeCan18 1
Helicobacter_pylori_Shi169 1
Helicobacter_pylori_Shi112 1
Helicobacter_pylori_Shi417 1
Helicobacter_pylori_XZ274 1
Helicobacter_pylori_Aklavik117 1
Helicobacter_pylori_SNT49 2
Helicobacter_pylori_Puno135 1
Helicobacter_pylori_Puno120 1
Helicobacter_pylori_ELS37 1
Helicobacter_pylori_Gambia94/24 1
Helicobacter_pylori_SouthAfrica7 1
Helicobacter_pylori_India7 1
Helicobacter_pylori_Lithuania75 1
Helicobacter_pylori_2017 1
Helicobacter_pylori_2018 1
Helicobacter_pylori_908 1
Helicobacter_pylori_Sat464 1
Helicobacter_pylori_Cuz20 1
Helicobacter_pylori_PeCan4 1
Helicobacter_pylori_SJM180 1
Helicobacter_pylori_B8 1
Helicobacter_pylori_v225d 1
Helicobacter_pylori_35A 1
Helicobacter_pylori_P12 1
Helicobacter_pylori_G27 1
Helicobacter_pylori_Shi470 1
Helicobacter_pylori_HPAG1 1
Helicobacter_pylori_J99 2
Lawsonia_intracellularis_N343 1
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_ambifaria_MC40-6 1
Taylorella_equigenitalis_ATCC_35865 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 0
Rhodobacter_sphaeroides_ATCC_17025 0
Rhodospirillum_rubrum_ATCC_11170 0
Gluconobacter_oxydans_H24 0
Acetobacter_pasteurianus_386B 1
Acetobacter_pasteurianus_IFO_3283-12 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1
Acetobacter_pasteurianus_IFO_3283-32 1
Acetobacter_pasteurianus_IFO_3283-26 1
Acetobacter_pasteurianus_IFO_3283-22 1
Acetobacter_pasteurianus_IFO_3283-07 1
Acetobacter_pasteurianus_IFO_3283-03 1
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Haemophilus_influenzae_F3047 0
Haemophilus_influenzae_F3031 0
Haemophilus_influenzae_PittGG 0
Haemophilus_influenzae_86-028NP 0
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Shewanella_sp._W3-18-1 1
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_putrefaciens_200 1
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2
Xanthomonas_axonopodis_Xac29-1 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 1
Yersinia_pseudotuberculosis_IP_32953 1
Yersinia_pestis_biovar_Microtus_str._91001 2
Yersinia_pestis_A1122 2
Yersinia_pestis_Z176003 2
Yersinia_pestis_D182038 1
Yersinia_pestis_D106004 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2
Yersinia_pestis_Nepal516 2
Yersinia_pestis_Antiqua 1
Yersinia_pestis_Angola 2
Yersinia_pestis_KIM10+ 2
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 0
Erwinia_amylovora_CFBP1430 1
Salmonella_bongori_N268-08 2
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 2
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 2
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_KT2440 1
Pseudomonas_poae_RE*1-1-14 2
Pseudomonas_fluorescens_A506 2
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_sp.__SH024 0
Acinetobacter_calcoaceticus_ruh2202 0
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB0715 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_D1279779 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_SDF 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_baumannii_ACICU 0
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 0
Acinetobacter_johnsonii__SH046 2
Acinetobacter_lwoffii__SH145 0
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1
Francisella_tularensis_subsp._holarctica_F92 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1
Francisella_tularensis_subsp._holarctica_OSU18 1
Francisella_tularensis_subsp._holarctica_LVS 1
Francisella_tularensis_subsp._holarctica_FSC200 1
Francisella_tularensis_subsp._tularensis_TIGB03 1
Francisella_tularensis_subsp._tularensis_TI0902 1
Francisella_tularensis_subsp._tularensis_NE061598 1
Francisella_tularensis_subsp._tularensis_FSC198 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1
Francisella_cf._novicida_Fx1 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_69_2.0   (Green anole)   2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8
Latimeria_chalumnae_69_1   (Coelacanth)   9
Gadus_morhua_69_1   (Atlantic cod)   7
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   6
Takifugu_rubripes_69_4   (Torafugu)   6
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   6
Oryzias_latipes_69_1   (Japanese medaka)   8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   10
Oreochromis_niloticus_69_1.0   (Nile tilapia)   19
Danio_rerio_69_9   (Zebrafish)   16
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   10
Caenorhabditis_elegans_69_215   (Roundworm)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Heliconius_numata__(Incomplete) 0
Loa_loa_v3.3_(Request)   (Eye worm)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Malus_x_domestica_(Duplicate)   (Apple)   0
Acholeplasma_laidlawii_PG-8A_(duplicate) 4
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 42
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 37
Protein_Data_Bank_(all_PDB_sequenc) 4
TargetDB__(Targets) 8
STRING_v9.0.5_(STRING) 416
Uniprot_2018_03_genome 23346
UniProt__viral_sequences_(Viral) 13
NCBI_2017_08_genome 20215
NCBI_viral_sequences_(Viral) 17
Protozoadb_2010_08_(Protozoadb) 10

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