SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54236,47031,50729,_gap_,48678 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54236 - Ubiquitin-like
47031 - Second domain of FERM
50729 - PH domain-like
48678 - Moesin tail domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ovis_aries_76_3.1   (Sheep)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Capsaspora_owczarzaki_ATCC_30864_ 1

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1

Longest transcript per gene
Genome     Number
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
NCBI_2017_08_genome 10
Uniprot_2018_03_genome 840

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