SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54277,_gap_,54277 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54277 - CAD & PB1 domains
54277 - CAD & PB1 domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pinus_taeda   (Loblolly pine)   0
Solanum_lycopersicum_v.2.3   (Tomato)   1
Oryza_barthii_22   (African wild rice)   0
Bathycoccus_prasinos_ 1
Micromonas_pusilla_CCMP1545_v3.0 2

Others
Genome     Number
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
NCBI_2017_08_genome 3
Uniprot_2018_03_genome 56

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