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Domain combinations for _gap_,54511,57184,57196,57610,63825 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54511 - GFP-like
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57610 - Thyroglobulin type-1 domain
63825 - YWTD domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   0
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   0
Bos_taurus_69_3.1   (Cattle)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 315
NCBI_2017_08_genome 31

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