SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54695,141571 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54695 - POZ domain
141571 - Pentapeptide repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Canis_familiaris_76_3.1   (Dog)   1
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 2
Anas_platyrhynchos_76_1.0   (Mallard)   1
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Capitella_sp._I_ 1
Heliconius_melpomene_   (Postman butterfly)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Drosophila_erecta_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Daphnia_pulex_   (Common water flea)   1
Sarcoptes_scabiei 1
Mnemiopsis_leidyi   (Sea walnut)   1
Amphimedon_queenslandica 1
Proterospongia_sp._ATCC_50818_ 1
Sphaeroforma_arctica_JP610_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 3
Eucalyptus_grandis_v201   (Rose gum)   5
Prunus_persica_v139   (Peach)   1
Actinidia_chinensis_Hongyang_ 1
Triticum_aestivum_22   (Bread wheat)   1
Oryza_barthii_22   (African wild rice)   1
Oryza_glumaepatula_22 2
Oryza_brachyantha_22   (Malo sina)   0
Physcomitrella_patens 1
Naegleria_gruberi_ 2

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Hordeum_vulgare_22   (Domesticated barley)   6
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Canis_familiaris_69_3.1   (Dog)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1

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Others
Genome     Number
Heliconius_numata__(Incomplete) 1
STRING_v9.0.5_(STRING) 22
NCBI_2017_08_genome 201
Uniprot_2018_03_genome 1548

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