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Domain combinations for _gap_,54695,_gap_,49785,49785,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54695 - POZ domain
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gallus_gallus_76_4   (Chicken)   2
Anas_platyrhynchos_76_1.0   (Mallard)   1
Adineta_vaga 2
Helobdella_robusta_ 1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_suzukii 1
Drosophila_yakuba_1.3 1
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Drosophila_mojavensis_1.3 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Daphnia_pulex_   (Common water flea)   1
Meloidogyne_hapla_ 1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1

Longest transcript per gene
Genome     Number
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 6
Uniprot_2018_03_genome 666
NCBI_2017_08_genome 63

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.