SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,54791,54791,54791,54791,54791,_gap_,54791,54791,54791,54791,54791,54791,54791,54791,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Canis_familiaris_76_3.1   (Dog)   2
Saccoglossus_kowalevskii_v3.0 3
Anolis_carolinensis_76_2.0   (Green anole)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Pristionchus_pacificus_ 1
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 1

Longest transcript per gene
Genome     Number
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Canis_familiaris_69_3.1   (Dog)   1
Anolis_carolinensis_69_2.0   (Green anole)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 3078
NCBI_2017_08_genome 72

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]