Domain combinations for _gap_,55550,56112,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55550 - SH2 domain
56112 - Protein kinase-like (PK-like)
56112 - Protein kinase-like (PK-like)

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)	(Fruit fly)	1

Longest transcript per gene

Genome		Number
Pongo_abelii_69_2	(Sumatran orangutan)	1
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	0
Microcebus_murinus_69_1	(Gray mouse lemur)	0
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	1
Oryctolagus_cuniculus_69_2	(Rabbit)	0
Ochotona_princeps_69	(American pika)	0
Vicugna_pacos_69_1	(Alpaca)	0
Tursiops_truncatus_69_1	(Bottlenose dolphin)	0
Felis_catus_69	(Domestic cat)	0
Erinaceus_europaeus_69	(Western European hedgehog)	1
Echinops_telfairi_69	(Small Madagascar hedgehog)	0
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	1
Choloepus_hoffmanni_69_1	(Hoffmann's two-fingered sloth)	0
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	1
Drosophila_melanogaster_69_5	(Fruit fly)	1

Others

Genome		Number
STRING_v9.0.5_(STRING)		7
Uniprot_2018_03_genome		423
NCBI_2017_08_genome		66

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