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Home > SCOP hierarchy > Domain combination - _gap_,55681,52954

Domain combinations for _gap_,55681,52954 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 2

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 3

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_76_3 (Small-eared galago) 2

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 3

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 2

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 2

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 2

Ochotona_princeps_76 (American pika) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 2

Ovis_aries_76_3.1 (Sheep) 2

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 3

Felis_catus_76_6.2 (Domestic cat) 2

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 3

Pteropus_vampyrus_76_1 (Large flying fox) 2

Sorex_araneus_76_1 (European shrew) 2

Erinaceus_europaeus_76 (Western European hedgehog) 1

Loxodonta_africana_76_3 (African savanna elephant) 3

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Saccoglossus_kowalevskii_v3.0 3

Gallus_gallus_76_4 (Chicken) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_76_2.0 (Green anole) 1

Latimeria_chalumnae_76_1 (Coelacanth) 1

Gadus_morhua_76_1 (Atlantic cod) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2

Takifugu_rubripes_76_4 (Torafugu) 1

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3

Oryzias_latipes_76_1 (Japanese medaka) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Danio_rerio_76_9 (Zebrafish) 3

Oikopleura_dioica 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 0

Ciona_intestinalis_76 (Vase tunicate) 0

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1

Adineta_vaga 2

Helobdella_robusta_ 0

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Linepithema_humile_v1.1 (Argentine ant) 0

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 1

Atta_cephalotes_v1.1 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_suzukii 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 3

Drosophila_ananassae_1.3 1

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 1

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

Acyrthosiphon_pisum_ (Pea aphid) 0

Pristionchus_pacificus_ 0

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 2

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 0

Caenorhabditis_elegans_76_235 (Roundworm) 4

Caenorhabditis_briggsae_2 1

Hymenolepis_microstoma_ 0

Echinococcus_multilocularis_ 0

Echinococcus_granulosus_ 0

Taenia_solium_ (Pork tapeworm) 0

Schistosoma_mansoni_ 0

Mnemiopsis_leidyi (Sea walnut) 1

Thelohanellus_kitauei 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Trichoplax_adhaerens_ 1

Proterospongia_sp._ATCC_50818_ 1

Monosiga_brevicollis_ 1

Capsaspora_owczarzaki_ATCC_30864_ 1

Conidiobolus_coronatus_NRRL28638_v1.0 2

Phycomyces_blakesleeanus_ 1

Rhizopus_oryzae_RA_99-880_ 1

Mucor_circinelloides_ 1

Rhizomucor_miehei_CAU432_ 3

Sporisorium_reilianum_22 1

Ustilago_maydis_ 1

Mixia_osmundae_IAM_14324_v1.0 0

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0

Rhodotorula_graminis_WP1_v1.0 0

Microbotryum_violaceum_22 0

Postia_placenta_ 1

Phanerochaete_chrysosporium_RP-78_2.1 1

Daldinia_eschscholzii_EC12_v1.0 1

Apiospora_montagnei_NRRL_25634_v1.0 0

Magnaporthe_poae_ATCC_64411_22 1

Magnaporthe_grisea_70-15_ 1

Podospora_anserina_ 1

Neurospora_tetrasperma_ 1

Neurospora_discreta_FGSC_8579_ 1

Neurospora_crassa_OR74A_ 2

Verticillium_albo-atrum_VaMs.102_ 0

Verticillium_dahliae_VdLs.17_ 2

Acremonium_alcalophilumv_1.0 1

Glomerella_graminicola_22 1

Fusarium_graminearum_ 1

Nectria_haematococca_mpVI_ 1

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1

Fusarium_verticillioides_7600_ 1

Trichoderma_asperellum_CBS_433.97_v1.0 1

Trichoderma_atroviride_ 1

Trichoderma_reesei_1.2 1

Trichoderma_virens_Gv29-8_ 1

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1

Trichoderma_harzianum_CBS_226.95_v1.0 1

Amorphotheca_resinae_v1.0 (Creosote fungus) 1

Sclerotinia_sclerotiorum_ 1

Blumeria_graminis_22 1

Didymella_exigua_CBS_183.55_v1.0 1

Leptosphaeria_maculans_22 1

Setosphaeria_turcica_v1.0 2

Cochliobolus_miyabeanus_ATCC_44560_v1.0 2

Cochliobolus_victoriae_FI3_v1.0 2

Cochliobolus_carbonum_26-R-13_v1.0 2

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1

Cochliobolus_lunatus_m118_v2.0 2

Pyrenophora_teres_f._teres_22 2

Pyrenophora_tritici-repentis_ 2

Stagonospora_nodorum_ 1

Dothistroma_septosporum 0

Septoria_musiva_v1.0 0

Mycosphaerella_fijiensis_CIRAD86_ 0

Paracoccidioides_brasiliensis_Pb18_ 1

Coccidioides_posadasii_RMSCC_3488_ 1

Coccidioides_immitis_RS_ 1

Ajellomyces_dermatitidis_SLH14081_ 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1

Microsporum_canis_CBS_113480_ 1

Trichophyton_equinum_CBS_127.97_ 0

Trichophyton_verrucosum_HKI_0517_ 1

Arthroderma_benhamiae_CBS_112371_ 1

Trichophyton_tonsurans_CBS_112818_ 1

Trichophyton_rubrum_CBS_118892_ 1

Uncinocarpus_reesii_1704_ 2

Aspergillus_zonatus_v1.0 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 1

Aspergillus_brasiliensis_v1.0 1

Aspergillus_nidulans_FGSC_A4_ 2

Aspergillus_sydowii_v1.0 2

Aspergillus_versicolor_v1.0 2

Aspergillus_glaucus 1

Aspergillus_carbonarius_ITEM_5010_ 1

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_terreus_NIH2624_ 0

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 1

Aspergillus_oryzae_RIB40_ 1

Aspergillus_niger_22 1

Aspergillus_niger_ATCC_1015_ 1

Aspergillus_flavus_NRRL3357_ 0

Aspergillus_clavatus_NRRL_1_ 1

Penicillium_marneffei_ATCC_18224_ 1

Tuber_melanosporum_Mel28_22 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1

Candida_dubliniensis_CD36_ 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1

Pichia_stipitis_CBS_6054_ 1

Candida_guilliermondii_ATCC_6260_ 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1

Debaromyces_hansenii 2

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0

Candida_lusitaniae_ATCC_42720_ 1

Vanderwaltozyma_polyspora_DSM_70294_ 1

Kluyveromyces_thermotolerans_CBS_6340 1

Lachancea_kluyveri_ 2

Ashbya_gossypii_ATCC_10895_ 1

Saccharomyces_mikatae_MIT 1

Saccharomyces_paradoxus_MIT 1

Saccharomyces_cerevisiae_76 (Baker's yeast) 1

Saccharomyces_bayanus_MIT 1

Catenaria_anguillulae_PL171_v1.0 3

Allomyces_macrogynus_ATCC_38327_ 3

Spizellomyces_punctatus_DAOM_BR117_ 1

Dictyostelium_discoideum 1

Selaginella_moellendorffii_ 0

Eucalyptus_grandis_v201 (Rose gum) 2

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1

Gossypium_raimondii_v221 2

Citrus_clementina_v165 0

Citrus_sinensis_v154 (Sweet orange) 1

Thellungiella_halophila_v173 1

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 1

Capsella_rubella_v183 3

Arabidopsis_lyrata_ (Lyrate rockcress) 3

Arabidopsis_thaliana_10 (Thale cress) 2

Carica_papaya_ (Papaya) 0

Medicago_truncatula_ (Barrel medic) 2

Phaseolus_vulgaris_v186 (French bean) 2

Glycine_max_v109 (Soybean) 2

Cucumis_sativus_v122 (Cucumber) 1

Fragaria_vesca_ (Wild strawberry) 1

Prunus_persica_v139 (Peach) 1

Linum_usitatissimum_v200 (Flax) 2

Manihot_esculenta_v147 (Cassava) 2

Populus_trichocarpa_v156 (Black cottonwood) 3

Mimulus_guttatus_v140 (Spotted monkey flower) 1

Solanum_lycopersicum_v.2.3 (Tomato) 1

Solanum_tuberosum_ (Potato) 0

Actinidia_chinensis_Hongyang_ 0

Aquilegia_coerulea_v195 4

Triticum_urartu_22 1

Triticum_aestivum_22 (Bread wheat) 3

Aegilops_tauschii_22 1

Brachypodium_distachyon_ (Stiff brome) 1

Oryza_barthii_22 (African wild rice) 2

Oryza_meridionalis_22 2

Oryza_glumaepatula_22 0

Oryza_glaberrima (African rice) 0

Oryza_punctata_22 2

Oryza_nivara_22 2

Oryza_brachyantha_22 (Malo sina) 2

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 1

Oryza_sativa_v193 (Rice) 1

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 1

Panicum_virgatum_v202 (Switchgrass) 3

Setaria_italica_v164 (Foxtail millet) 1

Zea_mays_subsp._mays_ (Maize) 2

Zea_mays_v181 (Maize) 2

Sorghum_bicolor_ (Sorghum) 3

Musa_balbisiana (Balbis banana) 0

Musa_acuminata_22 (Wild Malaysian banana) 2

Amborella_trichopoda_22 1

Physcomitrella_patens 0

Coccomyxa_subellipsoidea_sp._C-169_v2 2

Asterochloris_sp._Cgr/DA1pho_v1.0 0

Chlorella_variabilis_sp._NC64A_ 0

Volvox_carteri_f._nagariensis_ 0

Volvox_carteri_v199 0

Chlamydomonas_reinhardtii_4.0 0

Ostreococcus_lucimarinus_CCE9901_ 1

Ostreococcus_tauri_ 0

Bathycoccus_prasinos_ 1

Micromonas_sp._RCC299_ 0

Micromonas_pusilla_CCMP1545_v3.0 2

Cyanidioschyzon_merolae_strain_10D_22 1

Cyanidioschyzon_merolae 1

Porphyridium_purpureum_02_2012 1

Thecamonas_trahens_ATCC_50062_ 0

Bigelowiella_natans_CCMP2755_22 3

Cyanophora_paradoxa_ 1

Leishmania_mexicana_2.4 1

Leishmania_major_strain_Friedlin_ 1

Leishmania_infantum_JPCM5_2.4 1

Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1

Trypanosoma_vivax_ 1

Trypanosoma_congolense_2.4 2

Trypanosoma_brucei_gambiense_v4.1 1

Trypanosoma_brucei_TREU927_v4.1 1

Ectocarpus_siliculosus 1

Aureococcus_anophagefferens_ 1

Pythium_ultimum_v1.7-2 2

Pythium_aphanidermatum_DAOM_BR444_22 2

Pythium_irregulare_DAOM_BR486_22 1

Pythium_vexans_DAOM_BR484_22 0

Phytophthora_infestans_T30-4_ 1

Phaeodactylum_tricornutumCCAP_1055/1 2

Fragilariopsis_cylindrus 3

Thalassiosira_pseudonana_CCMP1335 1

Perkinsus_marinus_ATCC_50983_ 3

Tetrahymena_thermophila_SB210_1_ 1

Ichthyophthirius_multifiliis_strain_G5_ 1

Cryptosporidium_hominis 1

Cryptosporidium_muris 1

Cryptosporidium_parvum_Iowa_II 1

Neospora_caninum 0

Toxoplasma_gondii_ME49 1

Toxoplasma_gondii_GT1 0

Babesia_bovis_T2Bo_ 2

Theileria_parva__ 1

Theileria_annulata 1

Plasmodium_falciparum_3D7_ 0

Plasmodium_knowlesi_strain_H_ 2

Plasmodium_yoelii_ssp._yoelii_1_ 1

Plasmodium_chabaudi_ 2

Plasmodium_berghei_ANKA_ 2

Symbiodinium_minutum_clade_B1_v1.2 0

Naegleria_gruberi_ 2

Trichomonas_vaginalis_ 1

Guillardia_theta_CCMP2712_v1.0_ 2

Mesoplasma_florum_L1 1

Mycoplasma_haemocanis_str._Illinois 1

Mycoplasma_haemofelis_Ohio2 1

Corynebacterium_resistens_DSM_45100 1

Rothia_mucilaginosa_DY-18 1

Deinococcus_gobiensis_I-0 1

Deinococcus_deserti_VCD115 1

Deinococcus_maricopensis_DSM_21211 1

Deinococcus_geothermalis_DSM_11300 1

Deinococcus_proteolyticus_MRP 1

Deinococcus_radiodurans_R1 1

Meiothermus_silvanus_DSM_9946 1

Meiothermus_ruber_DSM_1279 1

Thermus_scotoductus_SA-01 1

Thermus_thermophilus_HB27 1

Bacillus_thuringiensis_str._Al_Hakam 1

Bacillus_cereus_03BB102 1

Bacillus_anthracis_str._A0248 1

Ignavibacterium_album_JCM_16511 1

Pelodictyon_phaeoclathratiforme_BU-1 1

Chlorobium_luteolum_DSM_273 1

Chlorobium_chlorochromatii_CaD3 1

Chlorobium_phaeobacteroides_DSM_266 1

Chlorobium_phaeovibrioides_DSM_265 1

Chlorobium_limicola_DSM_245 1

Chlorobaculum_parvum_NCIB_8327 1

Chloroherpeton_thalassium_ATCC_35110 1

Prosthecochloris_aestuarii_DSM_271 1

Haliscomenobacter_hydrossis_DSM_1100 1

Saprospira_grandis_str._Lewin 1

Niastella_koreensis_GR20-10 2

Salinibacter_ruber_M8 1

Flexibacter_litoralis_DSM_6794 1

Candidatus_Amoebophilus_asiaticus_5a2 1

Candidatus_Cardinium_hertigii 1

Belliella_baltica_DSM_15883 1

Cyclobacterium_marinum_DSM_745 1

Marivirga_tractuosa_DSM_4126 1

Fibrella_aestuarina 1

Dyadobacter_fermentans_DSM_18053 1

Cytophaga_hutchinsonii_ATCC_33406 1

Spirosoma_linguale_DSM_74 1

Runella_slithyformis_DSM_19594 1

Parabacteroides_distasonis_ATCC_8503 1

Tannerella_forsythia_ATCC_43037 1

Paludibacter_propionicigenes_WB4 1

Odoribacter_splanchnicus_DSM_20712 1

Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1

Bacteroides_sp._CF50 1

Prevotella_melaninogenica_ATCC_25845 1

Prevotella_intermedia_17 1

Prevotella_denticola_F0289 1

Prevotella_ruminicola_23 1

Porphyromonas_asaccharolytica_DSM_20707 1

Porphyromonas_gingivalis_ATCC_33277 1

Alistipes_finegoldii_DSM_17242 1

Bacteroides_salanitronis_DSM_18170 1

Bacteroides_helcogenes_P_36-108 1

Bacteroides_vulgatus_ATCC_8482 1

Bacteroides_thetaiotaomicron_VPI-5482 1

Bacteroides_fragilis_YCH46 1

Pedobacter_saltans_DSM_12145 1

Solitalea_canadensis_DSM_3403 1

Pedobacter_heparinus_DSM_2366 1

Sphingobacterium_sp._21 1

Fluviicola_taffensis_DSM_16823 1

Candidatus_Sulcia_muelleri_SMDSEM 1

Owenweeksia_hongkongensis_DSM_17368 1

Zunongwangia_profunda_SM-A87 1

Krokinobacter_sp._4H-3-7-5 2

Gramella_forsetii_KT0803 1

Lacinutrix_sp._5H-3-7-4 1

Maribacter_sp._HTCC2170 2

Robiginitalea_biformata_HTCC2501 1

Croceibacter_atlanticus_HTCC2559 1

Aequorivita_sublithincola_DSM_14238 1

Zobellia_galactanivorans 1

Muricauda_ruestringensis_DSM_13258 1

Cellulophaga_algicola_DSM_14237 1

Cellulophaga_lytica_DSM_7489 1

Flavobacteriaceae_bacterium_3519-10 1

Polaribacter_sp._MED152 1

Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1

Ornithobacterium_rhinotracheale_DSM_15997 1

Capnocytophaga_canimorsus_Cc5 1

Capnocytophaga_ochracea_DSM_7271 1

Weeksella_virosa_DSM_16922 1

Flavobacterium_indicum_GPTSA100-9 1

Flavobacterium_psychrophilum_JIP02/86 2

Flavobacterium_branchiophilum_FL-15 1

Flavobacterium_columnare_ATCC_49512 2

Flavobacterium_johnsoniae_UW101 2

Parachlamydia_acanthamoebae_UV-7 1

Phycisphaera_mikurensis_NBRC_102666 1

Isosphaera_pallida_ATCC_43644 1

Planctomyces_brasiliensis_DSM_5305 1

Planctomyces_limnophilus_DSM_3776 1

Rhodopirellula_baltica_SH_1 1

Pirellula_staleyi_DSM_6068 1

Coraliomargarita_akajimensis_DSM_45221 1

Opitutus_terrae_PB90-1 1

Akkermansia_muciniphila_ATCC_BAA-835 1

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1

candidate_division_SR1_bacterium_RAAC1_SR1_1 1

Bdellovibrio_bacteriovorus_HD100 1

Sorangium_cellulosum_'So_ce_56' 0

Neisseria_meningitidis_alpha14 1

Candidatus_Zinderia_insecticola_CARI 1

Micavibrio_aeruginosavorus_ARL-13 1

Rhizobium_etli_CIAT_652 1

Methylocystis_sp._SC2 1

Xanthomonas_campestris_pv._campestris_str._B100 1

Enterobacter_aerogenes_KCTC_2190 0

Nanoarchaeum_equitans_Kin4-M 1

Candidatus_Caldiarchaeum_subterraneum 1

Cenarchaeum_symbiosum_A 1

Candidatus_Nitrosopumilus_sp._AR2 1

Nitrosopumilus_maritimus_SCM1 1

Pyrolobus_fumarii_1A 1

Hyperthermus_butylicus_DSM_5456 1

Thermogladius_cellulolyticus_1633 1

Ignisphaera_aggregans_DSM_17230 1

Ignicoccus_hospitalis_KIN4/I 1

Thermosphaera_aggregans_DSM_11486 1

Staphylothermus_hellenicus_DSM_12710 1

Staphylothermus_marinus_F1 1

Desulfurococcus_fermentans_DSM_16532 1

Desulfurococcus_kamchatkensis_1221n 1

Desulfurococcus_mucosus_DSM_2162 1

Thermofilum_sp._1910b 1

Thermofilum_pendens_Hrk_5 1

Vulcanisaeta_moutnovskia_768-28 1

Vulcanisaeta_distributa_DSM_14429 1

Caldivirga_maquilingensis_IC-167 1

Pyrobaculum_sp._1860 1

Pyrobaculum_calidifontis_JCM_11548 1

Pyrobaculum_arsenaticum_DSM_13514 1

Pyrobaculum_oguniense_TE7 1

Thermoproteus_neutrophilus_V24Sta 1

Pyrobaculum_aerophilum_str._IM2 1

Pyrobaculum_islandicum_DSM_4184 1

Thermoproteus_uzoniensis_768-20 1

Thermoproteus_tenax_Kra_1 1

Methanocella_arvoryzae_MRE50 1

Methanocella_conradii_HZ254 2

Methanocella_paludicola_SANAE 2

Methanosaeta_harundinacea_6Ac 1

Methanosaeta_thermophila_PT 1

Methanosaeta_concilii_GP6 1

Methanosalsum_zhilinae_DSM_4017 1

Methanohalobium_evestigatum_Z-7303 1

Methanococcoides_burtonii_DSM_6242 1

Methanosarcina_acetivorans_C2A 1

Methanosarcina_mazei_Go1 1

Methanosarcina_barkeri_str._Fusaro 1

Methanohalophilus_mahii_DSM_5219 1

Methanosphaerula_palustris_E1-9c 1

Methanoregula_boonei_6A8 1

Methanospirillum_hungatei_JF-1 1

Methanoplanus_petrolearius_DSM_11571 1

Methanoculleus_bourgensis_MS2 1

Methanoculleus_marisnigri_JR1 1

Methanopyrus_kandleri_AV19 1

Ferroglobus_placidus_DSM_10642 1

Archaeoglobus_profundus_DSM_5631 1

Archaeoglobus_veneficus_SNP6 1

Archaeoglobus_fulgidus_DSM_4304 1

Thermococcus_sp._4557 1

Thermococcus_onnurineus_NA1 1

Thermococcus_kodakarensis_KOD1 1

Thermococcus_gammatolerans_EJ3 1

Thermococcus_sibiricus_MM_739 1

Thermococcus_barophilus_MP 1

Pyrococcus_sp._ST04 1

Pyrococcus_yayanosii_CH1 1

Pyrococcus_horikoshii_OT3 1

Pyrococcus_abyssi_GE5 1

Pyrococcus_furiosus_COM1 1

Halorhabdus_utahensis_DSM_12940 1

Methanotorris_igneus_Kol_5 1

Methanocaldococcus_sp._FS406-22 1

Methanocaldococcus_fervens_AG86 1

Methanocaldococcus_vulcanius_M7 1

methanocaldococcus_infernus_ME 1

Methanocaldococcus_jannaschii_DSM_2661 1

Methanothermococcus_okinawensis_IH1 1

Methanococcus_aeolicus_Nankai-3 1

Methanococcus_maripaludis_C5 1

Methanococcus_voltae_A3 1

Methanococcus_vannielii_SB 1

Methanothermus_fervidus_DSM_2088 1

Methanothermobacter_marburgensis_str._Marburg 1

Methanothermobacter_thermautotrophicus_str._Delta_H 1

Methanosphaera_stadtmanae_DSM_3091 1

Methanobrevibacter_sp._AbM4 1

Methanobrevibacter_ruminantium_M1 1

Methanobrevibacter_smithii_ATCC_35061 1

Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1

Aciduliprofundum_sp._MAR08-339 1

Aciduliprofundum_boonei_T469 1

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 3

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 2

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 2

Mus_musculus_69_38 (House mouse) 2

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 2

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 2

Ochotona_princeps_69 (American pika) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 2

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 2

Felis_catus_69 (Domestic cat) 2

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 3

Pteropus_vampyrus_69_1 (Large flying fox) 2

Sorex_araneus_69_1 (European shrew) 2

Erinaceus_europaeus_69 (Western European hedgehog) 1

Loxodonta_africana_69_3 (African savanna elephant) 3

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Gadus_morhua_69_1 (Atlantic cod) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 2

Takifugu_rubripes_69_4 (Torafugu) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 3

Ciona_intestinalis_69 (Vase tunicate) 0

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 1

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 1

Arabidopsis_thaliana_10 (Thale cress) 2

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 3

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

Loa_loa_v3.3_(Request) (Eye worm) 2

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 0

Ricinus_communis__(Early_assembly) (Castor bean) 1

Nicotiana_benthamiana_0.4.4_(Early_draft) 0

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 1

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1

TargetDB__(Targets) 8

Core_Eukaryotic_Genes_458_(CEGMA) 2

Protozoadb_2010_08_(Protozoadb) 26

STRING_v9.0.5_(STRING) 202

NCBI_2017_08_genome 3816

Uniprot_2018_03_genome 25092

PDB_chains_(SCOP_1.75)_(PDB) 1

Protein_Data_Bank_(all_PDB_sequenc) 8

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Domain combinations for _gap_,55681,52954 superfamilies in groups of genomes