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Domain combinations for _gap_,55681,55681 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55681 - Class II aaRS and biotin synthetases
55681 - Class II aaRS and biotin synthetases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ochotona_princeps_76   (American pika)   2
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   2
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Drosophila_suzukii 1
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Coprinopsis_cinerea_okayama7_130_v3 0
Gloeophyllum_trabeumv1.0 1
Malus_domestica_v196   (Apple)   1
Aegilops_tauschii_22 0
Oryza_glumaepatula_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Sorghum_bicolor_   (Sorghum)   0
Pythium_iwayamai_DAOM_BR242034_22 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1

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Strains
Genome     Number
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 0

Longest transcript per gene
Genome     Number
Ochotona_princeps_69   (American pika)   2
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   2
Echinops_telfairi_69   (Small Madagascar hedgehog)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
TargetDB__(Targets) 2
STRING_v9.0.5_(STRING) 4
Protozoadb_2010_08_(Protozoadb) 5
NCBI_2017_08_genome 17
Uniprot_2018_03_genome 285

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