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Home > SCOP hierarchy > Domain combination - _gap_,55781,109604,_gap_

Domain combinations for _gap_,55781,109604,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55781 - GAF domain-like
109604 - HD-domain/PDEase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Poecilia_formosa_76 (Amazon molly) 0

Danio_rerio_76_9 (Zebrafish) 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Nasonia_vitripennis_ (Jewel wasp) 1

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1

Atta_cephalotes_v1.1 0

Drosophila_persimilis_1.3 1

Drosophila_ananassae_1.3 0

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 0

Meloidogyne_incognita_ (Southern root-knot nematode) 1

Onchocerca_volvulus_22 1

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 1

Caenorhabditis_elegans_76_235 (Roundworm) 2

Caenorhabditis_briggsae_2 1

Mnemiopsis_leidyi (Sea walnut) 1

Ectocarpus_siliculosus 1

Phytophthora_capsici_ 1

Symbiodinium_minutum_clade_B1_v1.2 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 2

Longest transcript per gene
Genome Number

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Caenorhabditis_elegans_69_215 (Roundworm) 1

Others
Genome Number

Uniprot_2018_03_genome 711

TargetDB__(Targets) 1

STRING_v9.0.5_(STRING) 7

NCBI_2017_08_genome 56

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