SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,55781,47384,55874 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 1
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Selaginella_moellendorffii_ 3
Pinus_taeda   (Loblolly pine)   0
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 2
Citrus_clementina_v165 3
Citrus_sinensis_v154   (Sweet orange)   5
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   1
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   1
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   1
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 4
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   1
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 0
Cyanophora_paradoxa_ 1
Naegleria_gruberi_ 0
Thermobaculum_terrenum_ATCC_BAA-798 3
Leptolyngbya_sp._PCC_7376 2
Acaryochloris_marina_MBIC11017 2
Synechocystis_sp._PCC_6803 2
Thermosynechococcus_sp._NK55 1
Thermosynechococcus_elongatus_BP-1 1
Synechococcus_sp._PCC_6312 1
Synechococcus_elongatus_PCC_7942 1
Microcoleus_sp._PCC_7113 3
Trichodesmium_erythraeum_IMS101 2
Geitlerinema_sp._PCC_7407 2
Cyanothece_sp._PCC_8802 3
Gloeocapsa_sp._PCC_7428 4
cyanobacterium_UCYN-A 1
Halothece_sp._PCC_7418 3
Microcystis_aeruginosa_NIES-843 2
Gloeobacter_violaceus_PCC_7421 0
Rivularia_sp._PCC_7116 7
Calothrix_sp._PCC_7507 4
Anabaena_variabilis_ATCC_29413 3
'Nostoc_azollae'_0708 3
Nostoc_sp._PCC_7107 4
Nostoc_punctiforme_PCC_73102 4
Nostoc_sp._PCC_7120 3
Nostoc_sp._PCC_7524 3
Anabaena_sp._90 2
Eggerthella_sp._YY7918 1
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 0
Kineococcus_radiotolerans_SRS30216 1
Thermomonospora_curvata_DSM_43183 0
Kitasatospora_setae_KM-6054 0
Streptomyces_bingchenggensis_BCW-1 0
Actinosynnema_mirum_DSM_43827 0
Pseudonocardia_dioxanivorans_CB1190 0
Amycolatopsis_mediterranei_U32 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_chubuense_NBB4 0
Anaerolinea_thermophila_UNI-1 1
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 2
Roseiflexus_castenholzii_DSM_13941 3
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 0
Meiothermus_silvanus_DSM_9946 1
Sulfobacillus_acidophilus_DSM_10332 1
Candidatus_Desulforudis_audaxviator_MP104C 0
Pelotomaculum_thermopropionicum_SI 0
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 0
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 1
Desulfitobacterium_hafniense_Y51 1
Desulfitobacterium_dehalogenans_ATCC_51507 1
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 0
Clostridium_difficile_630 1
Clostridium_saccharolyticum_WM1 1
Heliobacterium_modesticaldum_Ice1 0
Alkaliphilus_oremlandii_OhILAs 1
Clostridium_novyi_NT 0
Clostridium_ljungdahlii_DSM_13528 0
Clostridium_kluyveri_DSM_555 0
Mahella_australiensis_50-1_BON 1
Carnobacterium_sp._17-4 1
Kyrpidia_tusciae_DSM_2912 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 1
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Listeria_innocua_Clip11262 0
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Listeria_ivanovii_subsp._ivanovii_PAM_55 0
Solibacillus_silvestris_StLB046 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Bacillus_pseudofirmus_OF4 1
Candidatus_Cloacamonas_acidaminovorans 0
Pelodictyon_phaeoclathratiforme_BU-1 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Salinibacter_ruber_M8 3
Belliella_baltica_DSM_15883 0
Fibrella_aestuarina 0
Dyadobacter_fermentans_DSM_18053 0
Spirosoma_linguale_DSM_74 0
Robiginitalea_biformata_HTCC2501 0
Cellulophaga_algicola_DSM_14237 1
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 0
Coraliomargarita_akajimensis_DSM_45221 1
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Brachyspira_murdochii_DSM_12563 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Spirochaeta_smaragdinae_DSM_11293 0
Treponema_azotonutricium_ZAS-9 0
Treponema_primitia_ZAS-2 0
Spirochaeta_africana_DSM_8902 0
Thermodesulfatator_indicus_DSM_15286 1
Deferribacter_desulfuricans_SSM1 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 1
Acidobacterium_capsulatum_ATCC_51196 1
Candidatus_Nitrospira_defluvii 2
Leptospirillum_ferrooxidans_C2-3 0
Candidatus_Methylomirabilis_oxyfera 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1
Acidithiobacillus_ferrivorans_SS3 0
Acidithiobacillus_caldus_SM-1 0
Acidithiobacillus_ferrooxidans_ATCC_53993 0
Wolinella_succinogenes_DSM_1740 0
Desulfobacca_acetoxidans_DSM_11109 1
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 1
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfatibacillum_alkenivorans_AK-01 0
Desulfovibrio_magneticus_RS-1 0
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 5
Geobacter_uraniireducens_Rf4 1
Geobacter_lovleyi_SZ 2
Geobacter_bemidjiensis_Bem 5
Geobacter_sulfurreducens_KN400 3
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 3
Pelobacter_carbinolicus_DSM_2380 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 3
Anaeromyxobacter_sp._Fw109-5 6
Anaeromyxobacter_dehalogenans_2CP-1 6
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 4
Myxococcus_xanthus_DK_1622 2
Myxococcus_fulvus_HW-1 3
Dechloromonas_aromatica_RCB 3
Azoarcus_sp._KH32C 1
Dechlorosoma_suillum_PS 1
Chromobacterium_violaceum_ATCC_12472 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2
Methylibium_petroleiphilum_PM1 0
Thiomonas_arsenitoxydans 0
Thiomonas_intermedia_K12 0
Rubrivivax_gelatinosus_IL144 1
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_solanacearum_CFBP2957 0
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 0
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Burkholderia_glumae_BGR1 0
Alicycliphilus_denitrificans_K601 1
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 0
Rhodoferax_ferrireducens_T118 1
Acidovorax_sp._KKS102 0
Acidovorax_citrulli_AAC00-1 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Comamonas_testosteroni_CNB-2 0
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 0
Janthinobacterium_sp._Marseille 0
Herbaspirillum_seropedicae_SmR1 0
Bordetella_avium_197N 1
Bordetella_pertussis_Tohama_I 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosomonas_sp._Is79A3 0
Sideroxydans_lithotrophicus_ES-1 1
Gallionella_capsiferriformans_ES-2 1
Methylotenera_mobilis_JLW8 0
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Magnetococcus_marinus_MC-1 2
Asticcacaulis_excentricus_CB_48 0
Caulobacter_crescentus_NA1000 0
Sphingobium_sp._SYK-6 0
Sphingobium_chlorophenolicum_L-1 0
Sphingomonas_sp._MM-1 0
Sphingomonas_wittichii_RW1 0
Rhodobacter_sphaeroides_ATCC_17029 0
Rhodospirillum_photometricum_DSM_122 0
Tistrella_mobilis_KA081020-065 0
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_centenum_SW 0
Rhodospirillum_rubrum_F11 1
Azospirillum_lipoferum_4B 0
Azospirillum_sp._B510 0
Azospirillum_brasilense_Sp245 1
Gluconacetobacter_xylinus_NBRC_3288 0
Granulibacter_bethesdensis_CGDNIH1 1
Gluconacetobacter_diazotrophicus_PAl_5 0
Acetobacter_pasteurianus_IFO_3283-01 0
Xanthobacter_autotrophicus_Py2 0
Azorhizobium_caulinodans_ORS_571 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_populi_BJ001 0
Methylobacterium_radiotolerans_JCM_2831 0
Ochrobactrum_anthropi_ATCC_49188 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_meliloti_AK83 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Rhizobium_etli_CIAT_652 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 0
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 0
Methylocella_silvestris_BL2 0
Rhodomicrobium_vannielii_ATCC_17100 0
Hyphomicrobium_sp._MC1 0
Hyphomicrobium_denitrificans_ATCC_51888 0
Oligotropha_carboxidovorans_OM4 0
Rhodopseudomonas_palustris_BisA53 0
Nitrobacter_hamburgensis_X14 0
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 0
Hahella_chejuensis_KCTC_2396 0
Marinomonas_mediterranea_MMB-1 0
Methylomicrobium_alcaliphilum 1
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 0
Xanthomonas_axonopodis_pv._citri_str._306 1
Alkalilimnicola_ehrlichii_MLHE-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Providencia_stuartii_MRSN_2154 1
Proteus_mirabilis_HI4320 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 0
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 0
Dickeya_dadantii_Ech703 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Pantoea_sp._At-9b 0
Pantoea_ananatis_LMG_20103 0
Erwinia_billingiae_Eb661 0
Shigella_boydii_CDC_3083-94 0
Enterobacter_sp._638 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Methylophaga_sp._JAM1 1
halophilic_archaeon_DL31 1
Methanocella_arvoryzae_MRE50 1
Halopiger_xanaduensis_SH-6 3
Haloterrigena_turkmenica_DSM_5511 1
Halorubrum_lacusprofundi_ATCC_49239 1
Halogeometricum_borinquense_DSM_11551 1
Natronomonas_pharaonis_DSM_2160 1

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Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Chroococcidiopsis_thermalis_PCC_7203 4
Chamaesiphon_minutus_PCC_6605 2
Synechocystis_sp._PCC_6803_substr._PCC-P 2
Synechocystis_sp._PCC_6803_substr._PCC-N 2
Synechocystis_sp._PCC_6803_substr._GT-I 2
Synechocystis_sp._PCC_6803 2
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._JA-2-3B'a(2-13) 2
Synechococcus_sp._JA-3-3Ab 2
Synechococcus_sp._PCC_7002 3
Synechococcus_elongatus_PCC_6301 1
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 3
Oscillatoria_acuminata_PCC_6304 2
Arthrospira_platensis_NIES-39 2
Cyanothece_sp._PCC_7822 3
Cyanothece_sp._PCC_7425 2
Cyanothece_sp._PCC_7424 3
Cyanothece_sp._ATCC_51142 2
Cyanothece_sp._PCC_8801 3
Cyanobacterium_aponinum_PCC_10605 2
Cyanobacterium_stanieri_PCC_7202 2
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 4
Calothrix_parietina_Calothrix_sp._PCC_6303 4
Cylindrospermum_stagnale_PCC_7417 3
Anabaena_cylindrica_PCC_7122 3
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._EuI1c 0
Streptomyces_fulvissimus_DSM_40593 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Actinoplanes_friuliensis_DSM_7358 1
Mycobacterium_kansasii_ATCC_12478 0
Deinococcus_peraridilitoris_DSM_19664 1
Sulfobacillus_acidophilus_TPY 1
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_hafniense_DCB-2 1
Desulfotomaculum_gibsoniae_DSM_7213 0
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_kluyveri_NBRC_12016 0
Clostridium_pasteurianum_BC1 0
Clostridium_botulinum_BKT015925 0
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_mundtii_QU_25 1
Enterococcus_casseliflavus_EC20 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Listeria_monocytogenes_EGD_sequence 0
Listeria_monocytogenes_N53-1 0
Listeria_monocytogenes_La111 0
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC2376 0
Listeria_monocytogenes_SLCC5850 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_SLCC2540 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Listeria_monocytogenes_10403S 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_Finland_1998 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Listeria_monocytogenes_EGD-e 0
Bacillus_infantis_NRRL_B-14911 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_14579 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Salinibacter_ruber_DSM_13855 2
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 0
Acidithiobacillus_ferrooxidans_ATCC_23270 0
Bdellovibrio_exovorus_JSS 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_vulgaris_RCH1 0
Desulfovibrio_vulgaris_str._Hildenborough 0
Geobacter_sp._M18 8
Geobacter_sulfurreducens_PCA 3
Sorangium_cellulosum_So0157-2 2
Anaeromyxobacter_sp._K 5
Anaeromyxobacter_dehalogenans_2CP-C 4
Myxococcus_stipitatus_DSM_14675 4
Burkholderia_phenoliruptrix_BR3459a 0
Pandoraea_pnomenusa_3kgm 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Bordetella_pertussis_CS 0
Bordetella_parapertussis_18323 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 0
Sulfuricella_denitrificans_skB26 1
Caulobacter_crescentus_CB15 0
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_2.4.1 0
Paracoccus_aminophilus_JCM_7686 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Rhodospirillum_rubrum_ATCC_11170 1
Gluconacetobacter_diazotrophicus_PAl_5 0
Acetobacter_pasteurianus_IFO_3283-12 0
Acetobacter_pasteurianus_IFO_3283-01-42C 0
Acetobacter_pasteurianus_IFO_3283-32 0
Acetobacter_pasteurianus_IFO_3283-26 0
Acetobacter_pasteurianus_IFO_3283-22 0
Acetobacter_pasteurianus_IFO_3283-07 0
Acetobacter_pasteurianus_IFO_3283-03 0
Methylobacterium_extorquens_DM4 0
Methylobacterium_extorquens_PA1 0
Sinorhizobium_fredii_USDA_257 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Mesorhizobium_australicum_WSM2073 0
Hyphomicrobium_denitrificans_1NES1 0
Oligotropha_carboxidovorans_OM5 0
Oligotropha_carboxidovorans_OM5 0
Rhodopseudomonas_palustris_DX-1 0
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_HaA2 0
Rhodopseudomonas_palustris_BisB5 0
Rhodopseudomonas_palustris_BisB18 0
Rhodopseudomonas_palustris_CGA009 0
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 1
Alcanivorax_dieselolei_B5 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Proteus_mirabilis_BB2000 0
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Rahnella_aquatilis_HX2 1
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 1
Cronobacter_sakazakii_CMCC_45402 0
Shigella_boydii_Sb227 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 0
Acinetobacter_johnsonii__SH046 0
Acinetobacter_lwoffii__SH145 0
Methanolobus_psychrophilus_R15 1
Natronococcus_occultus_SP4 1
Natronomonas_moolapensis_8.8.11 2

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Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   1

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
NCBI_plasmid_sequences_(Plasmids) 3
TargetDB__(Targets) 3
STRING_v9.0.5_(STRING) 145
Uniprot_2018_03_genome 30310
NCBI_2017_08_genome 3435

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