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  Home > SCOP hierarchy > Domain combination - _gap_,55785,47384,55874

Domain combinations for _gap_,55785,47384,55874 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capitella_sp._I_ 1
Rhodnius_prolixus_22 0
Caenorhabditis_japonica_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Sporisorium_reilianum_22 0
Mixia_osmundae_IAM_14324_v1.0 0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Selaginella_moellendorffii_ 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Malus_domestica_v196   (Apple)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Solanum_lycopersicum_v.2.3   (Tomato)   1
Actinidia_chinensis_Hongyang_ 0
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Physcomitrella_patens 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Thecamonas_trahens_ATCC_50062_ 0
Cyanophora_paradoxa_ 1
Ectocarpus_siliculosus 0
Phytophthora_capsici_ 0
Cryptosporidium_hominis 1
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 0
Thermobaculum_terrenum_ATCC_BAA-798 2
Leptolyngbya_sp._PCC_7376 2
Pseudanabaena_sp._PCC_7367 3
Acaryochloris_marina_MBIC11017 1
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 1
Thermosynechococcus_elongatus_BP-1 1
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 4
Geitlerinema_sp._PCC_7407 2
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 2
Halothece_sp._PCC_7418 2
Microcystis_aeruginosa_NIES-843 1
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 2
Calothrix_sp._PCC_7507 5
Anabaena_variabilis_ATCC_29413 2
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 4
Nostoc_punctiforme_PCC_73102 5
Nostoc_sp._PCC_7120 3
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 2
Eggerthella_lenta_DSM_2243 0
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Frankia_symbiont_of_Datisca_glomerata 2
Frankia_sp._EAN1pec 1
Streptomyces_violaceusniger_Tu_4113 1
Actinosynnema_mirum_DSM_43827 1
Nocardioides_sp._JS614 3
Microlunatus_phosphovorus_NM-1 1
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 4
Actinoplanes_missouriensis_431 7
Corynebacterium_glutamicum_R 1
Sanguibacter_keddieii_DSM_10542 4
Beutenbergia_cavernae_DSM_12333 2
Microbacterium_testaceum_StLB037 4
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2
Brachybacterium_faecium_DSM_4810 1
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 1
Arthrobacter_phenanthrenivorans_Sphe3 2
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Dehalococcoides_ethenogenes_195 4
Dehalogenimonas_lykanthroporepellens_BL-DC-9 2
Anaerolinea_thermophila_UNI-1 0
Thermomicrobium_roseum_DSM_5159 1
Herpetosiphon_aurantiacus_DSM_785 5
Roseiflexus_sp._RS-1 3
Roseiflexus_castenholzii_DSM_13941 4
Chloroflexus_sp._MS-G 2
Chloroflexus_sp._Y-400-fl 2
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 2
Deinococcus_gobiensis_I-0 1
Deinococcus_deserti_VCD115 1
Deinococcus_maricopensis_DSM_21211 2
Deinococcus_geothermalis_DSM_11300 0
Deinococcus_proteolyticus_MRP 1
Deinococcus_radiodurans_R1 0
Meiothermus_silvanus_DSM_9946 0
Anaerococcus_prevotii_DSM_20548 1
Finegoldia_magna_ATCC_29328 1
Megasphaera_elsdenii_DSM_20460 1
Acidaminococcus_fermentans_DSM_20731 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Symbiobacterium_thermophilum_IAM_14863 1
Clostridium_clariflavum_DSM_19732 3
Eubacterium_siraeum 2
Clostridium_cellulolyticum_H10 1
Clostridium_thermocellum_ATCC_27405 1
Ethanoligenens_harbinense_YUAN-3 2
Ruminococcus_sp. 1
Sulfobacillus_acidophilus_DSM_10332 2
Oscillibacter_valericigenes_Sjm18-20 2
butyrate-producing_bacterium_SM4/1 1
Candidatus_Desulforudis_audaxviator_MP104C 0
Thermincola_potens_JR 1
Pelotomaculum_thermopropionicum_SI 2
Desulfosporosinus_acidiphilus_SJ4 5
Desulfosporosinus_orientis_DSM_765 10
Dehalobacter_sp._DCA 2
Dehalobacter_sp._CF 3
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfitobacterium_hafniense_Y51 3
Desulfitobacterium_dehalogenans_ATCC_51507 4
Desulfotomaculum_reducens_MI-1 4
Desulfotomaculum_acetoxidans_DSM_771 6
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 4
Desulfotomaculum_ruminis_DSM_2154 3
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 0
Clostridium_difficile_630 2
Clostridium_sticklandii_DSM_519 1
Clostridium_lentocellum_DSM_5427 2
[Ruminococcus]_obeum 0
Heliobacterium_modesticaldum_Ice1 4
Alkaliphilus_oremlandii_OhILAs 1
Alkaliphilus_metalliredigens_QYMF 2
Clostridium_sp._BNL1100 2
Clostridium_novyi_NT 1
Clostridium_kluyveri_DSM_555 1
Clostridium_beijerinckii_NCIMB_8052 7
Clostridium_perfringens_ATCC_13124 3
Clostridium_cellulovorans_743B 1
Clostridium_botulinum_A_str._ATCC_3502 2
Clostridium_acetobutylicum_ATCC_824 1
Mahella_australiensis_50-1_BON 1
Caldicellulosiruptor_obsidiansis_OB47 1
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_hydrothermalis_108 1
Caldicellulosiruptor_owensensis_OL 1
Caldicellulosiruptor_lactoaceticus_6A 1
Caldicellulosiruptor_kristjanssonii_177R1B 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1
Caldicellulosiruptor_bescii_DSM_6725 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1
Carboxydothermus_hydrogenoformans_Z-2901 2
Ammonifex_degensii_KC4 3
Acetohalobium_arabaticum_DSM_5501 1
Halothermothrix_orenii_H_168 1
Carnobacterium_sp._17-4 0
Aerococcus_urinae_ACS-120-V-Col10a 1
Tetragenococcus_halophilus_NBRC_12172 1
Enterococcus_faecalis_62 1
Weissella_koreensis_KACC_15510 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_rhamnosus_Lc_705 1
Lactobacillus_ruminis_ATCC_27782 1
Lactobacillus_plantarum_JDM1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1
Lactobacillus_buchneri_NRRL_B-30929 1
Lactobacillus_buchneri 1
Lactobacillus_brevis_ATCC_367 1
Lactobacillus_acidophilus_30SC 1
Lactococcus_garvieae_ATCC_49156 1
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_intermedius_JTH08 1
Streptococcus_gallolyticus_UCN34 2
Streptococcus_pseudopneumoniae_IS7493 1
Streptococcus_pasteurianus_ATCC_43144 2
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1
Streptococcus_infantarius_subsp._infantarius_CJ18 2
Streptococcus_macedonicus_ACA-DC_198 2
Streptococcus_mitis_B6 1
Streptococcus_uberis_0140J 1
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_pyogenes_str._Manfredo 1
Streptococcus_pneumoniae_P1031 1
Streptococcus_agalactiae_A909 2
Streptococcus_mutans_NN2025 1
Streptococcus_thermophilus_LMD-9 1
Streptococcus_suis_P1/7 1
Streptococcus_sanguinis_SK36 1
Streptococcus_salivarius_57.I 1
Streptococcus_oralis_Uo5 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Exiguobacterium_sp._AT1b 1
Kyrpidia_tusciae_DSM_2912 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 2
Brevibacillus_brevis_NBRC_100599 2
Paenibacillus_sp._JDR-2 4
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 3
Paenibacillus_polymyxa_M1 1
Bacillus_selenitireducens_MLS10 2
Solibacillus_silvestris_StLB046 4
Lysinibacillus_sphaericus_C3-41 1
Oceanobacillus_iheyensis_HTE831 1
Anoxybacillus_flavithermus_WK1 3
Geobacillus_thermoleovorans_CCB_US3_UF5 2
Geobacillus_kaustophilus_HTA426 2
Geobacillus_sp._GHH01 2
Geobacillus_thermodenitrificans_NG80-2 2
Bacillus_sp._JS 2
Bacillus_sp._1NLA3E 2
Bacillus_amyloliquefaciens_FZB42 2
Bacillus_atrophaeus_1942 2
Bacillus_subtilis_subsp._subtilis_str._168 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2
Bacillus_halodurans_C-125 2
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 1
Bacillus_cereus_03BB102 1
Bacillus_pseudofirmus_OF4 2
Bacillus_cellulosilyticus_DSM_2522 1
Bacillus_pumilus_SAFR-032 2
Bacillus_megaterium_DSM_319 4
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1
Staphylococcus_lugdunensis_HKU09-01 1
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_epidermidis_RP62A 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1
Staphylococcus_aureus_subsp._aureus_JH1 1
Staphylococcus_aureus 1
Gemmatimonas_aurantiaca_T-27 2
Melioribacter_roseus_P3M 3
Ignavibacterium_album_JCM_16511 1
Pelodictyon_phaeoclathratiforme_BU-1 2
Chlorobium_luteolum_DSM_273 1
Chlorobium_phaeovibrioides_DSM_265 0
Chlorobium_limicola_DSM_245 1
Chlorobaculum_parvum_NCIB_8327 0
Chlorobium_tepidum_TLS 0
Chloroherpeton_thalassium_ATCC_35110 3
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 2
Chitinophaga_pinensis_DSM_2588 3
Salinibacter_ruber_M8 3
Flexibacter_litoralis_DSM_6794 1
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 5
Marivirga_tractuosa_DSM_4126 4
Fibrella_aestuarina 6
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 2
Cytophaga_hutchinsonii_ATCC_33406 4
Spirosoma_linguale_DSM_74 4
Parabacteroides_distasonis_ATCC_8503 2
Paludibacter_propionicigenes_WB4 0
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_sp._CF50 1
Prevotella_ruminicola_23 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Bacteroides_fragilis_YCH46 3
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 1
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 1
Krokinobacter_sp._4H-3-7-5 0
Gramella_forsetii_KT0803 0
Lacinutrix_sp._5H-3-7-4 0
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 0
Polaribacter_sp._MED152 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_johnsoniae_UW101 3
Waddlia_chondrophila_WSU_86-1044 1
Candidatus_Protochlamydia_amoebophila_UWE25 2
Parachlamydia_acanthamoebae_UV-7 2
Simkania_negevensis_Z 1
Phycisphaera_mikurensis_NBRC_102666 3
Isosphaera_pallida_ATCC_43644 1
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 6
Pirellula_staleyi_DSM_6068 2
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 1
Opitutus_terrae_PB90-1 3
Thermovirga_lienii_DSM_17291 1
Aminobacterium_colombiense_DSM_12261 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1
Anaerobaculum_mobile_DSM_13181 1
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 4
Brachyspira_murdochii_DSM_12563 1
Spirochaeta_smaragdinae_DSM_11293 5
Sphaerochaeta_pleomorpha_str._Grapes 2
Spirochaeta_caldaria_DSM_7334 2
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 0
Treponema_denticola_ATCC_35405 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 2
Thermodesulfatator_indicus_DSM_15286 3
Thermodesulfobacterium_sp._OPB45 1
Desulfurispirillum_indicum_S5 9
Calditerrivibrio_nitroreducens_DSM_19672 3
Denitrovibrio_acetiphilus_DSM_12809 5
Deferribacter_desulfuricans_SSM1 2
Flexistipes_sinusarabici_DSM_4947 1
Mesotoga_prima_MesG1.Ag.4.2 1
Kosmotoga_olearia_TBF_19.5.1 1
Fervidobacterium_pennivorans_DSM_9078 1
Fervidobacterium_nodosum_Rt17-B1 1
Thermosipho_melanesiensis_BI429 1
Thermosipho_africanus_TCF52B 1
Thermotoga_lettingae_TMO 1
Thermotoga_thermarum_DSM_5069 1
Thermotoga_sp._RQ2 1
Thermotoga_naphthophila_RKU-10 1
Thermotoga_petrophila_RKU-1 1
Thermotoga_neapolitana_DSM_4359 1
Thermotoga_maritima_MSB8 1
Thermovibrio_ammonificans_HB-1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1
Thermocrinis_albus_DSM_14484 1
Aquifex_aeolicus_VF5 1
Hydrogenobacter_thermophilus_TK-6 1
Candidatus_Chloracidobacterium_thermophilum_B 3
Candidatus_Solibacter_usitatus_Ellin6076 5
Granulicella_tundricola_MP5ACTX9 7
Granulicella_mallensis_MP5ACTX8 4
Candidatus_Koribacter_versatilis_Ellin345 4
Terriglobus_saanensis_SP1PR4 4
Terriglobus_roseus_DSM_18391 6
Acidobacterium_capsulatum_ATCC_51196 4
Thermodesulfovibrio_yellowstonii_DSM_11347 2
Candidatus_Nitrospira_defluvii 6
Leptospirillum_ferrooxidans_C2-3 3
Candidatus_Methylomirabilis_oxyfera 3
candidate_division_SR1_bacterium_RAAC1_SR1_1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1
Candidatus_Saccharimonas_aalborgensis 1
Acidithiobacillus_ferrivorans_SS3 2
Acidithiobacillus_caldus_SM-1 3
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Bacteriovorax_marinus_SJ 1
Bdellovibrio_bacteriovorus_HD100 4
Sulfurospirillum_deleyianum_DSM_6946 4
Sulfurospirillum_barnesii_SES-3 3
Arcobacter_sp._L 4
Arcobacter_nitrofigilis_DSM_7299 10
Arcobacter_butzleri_RM4018 2
Campylobacter_curvus_525.92 0
uncultured_Sulfuricurvum_sp._RIFRC-1 2
Sulfuricurvum_kujiense_DSM_16994 1
Sulfurimonas_autotrophica_DSM_16294 2
Sulfurimonas_denitrificans_DSM_1251 2
Wolinella_succinogenes_DSM_1740 2
Desulfarculus_baarsii_DSM_2075 1
Desulfobacca_acetoxidans_DSM_11109 4
Syntrophus_aciditrophicus_SB 3
Desulfomonile_tiedjei_DSM_6799 13
Syntrophobacter_fumaroxidans_MPOB 8
Desulfurivibrio_alkaliphilus_AHT2 7
Desulfotalea_psychrophila_LSv54 4
Desulfobulbus_propionicus_DSM_2032 4
Desulfatibacillum_alkenivorans_AK-01 10
Desulfobacterium_autotrophicum_HRM2 5
Desulfococcus_oleovorans_Hxd3 1
Desulfohalobium_retbaense_DSM_5692 5
Desulfomicrobium_baculatum_DSM_4028 7
Desulfovibrio_piezophilus 7
Desulfovibrio_aespoeensis_Aspo-2 6
Lawsonia_intracellularis_PHE/MN1-00 1
Desulfovibrio_magneticus_RS-1 8
Desulfovibrio_alaskensis_G20 8
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 8
Desulfovibrio_salexigens_DSM_2638 13
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Desulfovibrio_africanus_str._Walvis_Bay 6
Hippea_maritima_DSM_10411 2
Geobacter_daltonii_FRC-32 9
Geobacter_sp._M21 6
Geobacter_uraniireducens_Rf4 6
Geobacter_lovleyi_SZ 6
Geobacter_bemidjiensis_Bem 6
Geobacter_sulfurreducens_KN400 8
Geobacter_metallireducens_GS-15 4
Pelobacter_propionicus_DSM_2379 5
Pelobacter_carbinolicus_DSM_2380 3
Haliangium_ochraceum_DSM_14365 4
Sorangium_cellulosum_'So_ce_56' 4
Anaeromyxobacter_sp._Fw109-5 7
Anaeromyxobacter_dehalogenans_2CP-1 3
Stigmatella_aurantiaca_DW4/3-1 9
Corallococcus_coralloides_DSM_2259 8
Myxococcus_xanthus_DK_1622 7
Myxococcus_fulvus_HW-1 6
Dechloromonas_aromatica_RCB 4
Thauera_sp._MZ1T 6
Azoarcus_sp._KH32C 8
Azoarcus_sp._BH72 6
Aromatoleum_aromaticum_EbN1 2
Dechlorosoma_suillum_PS 4
Pseudogulbenkiania_sp._NH8B 3
Laribacter_hongkongensis_HLHK9 3
Chromobacterium_violaceum_ATCC_12472 2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 6
beta_proteobacterium_CB 1
Methylibium_petroleiphilum_PM1 5
Thiomonas_arsenitoxydans 2
Thiomonas_intermedia_K12 3
Rubrivivax_gelatinosus_IL144 6
Leptothrix_cholodnii_SP-6 4
Burkholderia_rhizoxinica_HKI_454 2
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 3
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 2
Cupriavidus_taiwanensis_LMG_19424 2
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 2
Ralstonia_pickettii_12D 3
Ralstonia_solanacearum_CFBP2957 3
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1
Burkholderia_sp._RPE64 2
Burkholderia_sp._CCGE1002 2
Burkholderia_thailandensis_E264 4
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 2
Burkholderia_glumae_BGR1 2
Verminephrobacter_eiseniae_EF01-2 3
Alicycliphilus_denitrificans_K601 5
Ramlibacter_tataouinensis_TTB310 6
Delftia_sp._Cs1-4 3
Delftia_acidovorans_SPH-1 3
Polaromonas_sp._JS666 4
Polaromonas_naphthalenivorans_CJ2 4
Variovorax_paradoxus_S110 3
Rhodoferax_ferrireducens_T118 4
Acidovorax_ebreus_TPSY 3
Acidovorax_sp._KKS102 4
Acidovorax_sp._JS42 3
Acidovorax_citrulli_AAC00-1 3
Acidovorax_avenae_subsp._avenae_ATCC_19860 3
Comamonas_testosteroni_CNB-2 3
Herminiimonas_arsenicoxydans 4
Collimonas_fungivorans_Ter331 4
Janthinobacterium_sp._Marseille 5
Herbaspirillum_seropedicae_SmR1 4
Pusillimonas_sp._T7-7 2
Taylorella_asinigenitalis_MCE3 1
Taylorella_equigenitalis_MCE9 1
Bordetella_petrii_DSM_12804 2
Bordetella_avium_197N 2
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 2
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 2
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 3
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 2
Sideroxydans_lithotrophicus_ES-1 3
Gallionella_capsiferriformans_ES-2 1
Methylotenera_versatilis_301 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Methylobacillus_flagellatus_KT 2
Magnetococcus_marinus_MC-1 3
Parvularcula_bermudensis_HTCC2503 5
Asticcacaulis_excentricus_CB_48 2
Brevundimonas_subvibrioides_ATCC_15264 2
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 2
Erythrobacter_litoralis_HTCC2594 0
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_sp._SYK-6 0
Sphingobium_japonicum_UT26S 0
Sphingobium_chlorophenolicum_L-1 0
Sphingomonas_sp._MM-1 0
Sphingomonas_wittichii_RW1 2
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1
Maricaulis_maris_MCS10 4
Hirschia_baltica_ATCC_49814 1
Hyphomonas_neptunium_ATCC_15444 1
Dinoroseobacter_shibae_DFL_12 0
Phaeobacter_gallaeciensis_2.10 0
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 0
Ruegeria_sp._TM1040 1
Ruegeria_pomeroyi_DSS-3 0
Ketogulonigenium_vulgarum_WSH-001 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 2
Rhodobacter_capsulatus_SB_1003 2
Paracoccus_denitrificans_PD1222 1
Rhodospirillum_photometricum_DSM_122 3
Tistrella_mobilis_KA081020-065 4
Magnetospirillum_magneticum_AMB-1 16
Rhodospirillum_centenum_SW 4
Rhodospirillum_rubrum_F11 4
Azospirillum_lipoferum_4B 8
Azospirillum_sp._B510 11
Azospirillum_brasilense_Sp245 5
Gluconacetobacter_diazotrophicus_PAl_5 2
Acidiphilium_multivorum_AIU301 0
Acidiphilium_cryptum_JF-5 0
Acetobacter_pasteurianus_IFO_3283-01 0
Polymorphum_gilvum_SL003B-26A1 3
Micavibrio_aeruginosavorus_ARL-13 1
Starkeya_novella_DSM_506 2
Xanthobacter_autotrophicus_Py2 2
Azorhizobium_caulinodans_ORS_571 7
Methylobacterium_chloromethanicum_CM4 3
Methylobacterium_extorquens_AM1 3
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 3
Methylobacterium_nodulans_ORS_2060 2
Methylobacterium_radiotolerans_JCM_2831 5
Parvibaculum_lavamentivorans_DS-1 4
Ochrobactrum_anthropi_ATCC_49188 1
Brucella_microti_CCM_4915 2
Brucella_pinnipedialis_B2/94 2
Brucella_canis_ATCC_23365 2
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 2
Brucella_ovis_ATCC_25840 2
Brucella_abortus_S19 2
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 2
Sinorhizobium_meliloti_AK83 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3
Rhizobium_etli_CIAT_652 5
Rhizobium_leguminosarum_bv._viciae_3841 3
Agrobacterium_tumefaciens_str._C58 3
Agrobacterium_radiobacter_K84 1
Agrobacterium_sp._H13-3 6
Agrobacterium_vitis_S4 1
Candidatus_Liberibacter_asiaticus_str._psy62 1
Mesorhizobium_sp._BNC1 2
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 2
Beijerinckia_indica_subsp._indica_ATCC_9039 4
Pelagibacterium_halotolerans_B2 4
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 2
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 2
Rhodopseudomonas_palustris_BisA53 4
Nitrobacter_winogradskyi_Nb-255 2
Nitrobacter_hamburgensis_X14 3
Bradyrhizobium_japonicum_USDA_110 4
Bradyrhizobium_sp._ORS_278 3
Methylocystis_sp._SC2 1
Bartonella_tribocorum_CIP_105476 1
Bartonella_clarridgeiae_73 0
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 0
Bartonella_quintana_str._Toulouse 1
Bartonella_bacilliformis_KC583 0
Saccharophagus_degradans_2-40 6
Teredinibacter_turnerae_T7901 5
Cellvibrio_japonicus_Ueda107 4
Gallibacterium_anatis_UMN179 1
Pasteurella_multocida_subsp._multocida_str._3480 1
Haemophilus_parasuis_SH0165 0
Haemophilus_influenzae_PittEE 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Oceanimonas_sp._GK1 1
Tolumonas_auensis_DSM_9187 1
Aeromonas_veronii_B565 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Aliivibrio_salmonicida_LFI1238 1
Vibrio_fischeri_MJ11 1
Vibrio_sp._Ex25 2
Vibrio_harveyi_ATCC_BAA-1116 2
Vibrio_parahaemolyticus_RIMD_2210633 2
Vibrio_splendidus_LGP32 1
Vibrio_anguillarum_775 1
Vibrio_furnissii_NCTC_11218 2
Vibrio_vulnificus_MO6-24/O 2
Vibrio_cholerae_O395 2
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 0
Psychromonas_sp._CNPT3 2
Idiomarina_loihiensis_L2TR 1
Ferrimonas_balearica_DSM_9799 2
Shewanella_piezotolerans_WP3 3
Shewanella_loihica_PV-4 2
Shewanella_halifaxensis_HAW-EB4 2
Shewanella_sediminis_HAW-EB3 2
Shewanella_denitrificans_OS217 3
Shewanella_pealeana_ATCC_700345 2
Shewanella_oneidensis_MR-1 2
Shewanella_baltica_OS185 3
Shewanella_woodyi_ATCC_51908 2
Shewanella_sp._MR-4 2
Shewanella_amazonensis_SB2B 3
Shewanella_violacea_DSS12 3
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 3
Colwellia_psychrerythraea_34H 2
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 3
Pseudoalteromonas_haloplanktis_TAC125 2
Glaciecola_sp._4H-3-7+YE-5 3
Glaciecola_nitratireducens_FR1064 3
Marinobacter_adhaerens_HP15 5
Marinobacter_sp._BSs20148 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 5
Marinobacter_aquaeolei_VT8 6
Alteromonas_sp._SN2 2
Alteromonas_macleodii_str._'Deep_ecotype' 3
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 6
Alcanivorax_borkumensis_SK2 4
Marinomonas_posidonica_IVIA-Po-181 3
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 1
Chromohalobacter_salexigens_DSM_3043 1
Halomonas_elongata_DSM_2581 2
Methylomicrobium_alcaliphilum 4
Methylomonas_methanica_MC09 2
Methylococcus_capsulatus_str._Bath 1
Dichelobacter_nodosus_VCS1703A 1
Rhodanobacter_denitrificans 3
Frateuria_aurantia_DSM_6220 2
Pseudoxanthomonas_spadix_BD-a59 2
Pseudoxanthomonas_suwonensis_11-1 3
Stenotrophomonas_maltophilia_K279a 2
Xylella_fastidiosa_M23 1
Xanthomonas_axonopodis_pv._citri_str._306 2
Xanthomonas_albilineans_GPE_PC73 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 2
Xanthomonas_campestris_pv._campestris_str._B100 3
Halothiobacillus_neapolitanus_c2 2
Spiribacter_sp._UAH-SP71 1
Alkalilimnicola_ehrlichii_MLHE-1 4
Thioalkalivibrio_sulfidophilus_HL-EbGr7 3
Thioalkalivibrio_sp._K90mix 3
Halorhodospira_halophila_SL1 2
Allochromatium_vinosum_DSM_180 2
Thiocystis_violascens_DSM_198 2
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 2
Nitrosococcus_oceani_ATCC_19707 1
Coxiella_burnetii_Dugway_5J108-111 0
Legionella_longbeachae_NSW150 1
Legionella_pneumophila_str._Corby 1
gamma_proteobacterium_HdN1 3
Photorhabdus_asymbiotica 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Xenorhabdus_bovienii_SS-2004 1
Xenorhabdus_nematophila_ATCC_19061 1
Providencia_stuartii_MRSN_2154 1
Proteus_mirabilis_HI4320 1
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 2
Rahnella_sp._Y9602 2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_pseudotuberculosis_IP_31758 1
Yersinia_pestis_Pestoides_F 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Serratia_sp._AS12 1
Serratia_sp._ATCC_39006 2
Serratia_plymuthica_AS9 1
Serratia_proteamaculans_568 1
Dickeya_dadantii_Ech703 2
Dickeya_zeae_Ech1591 2
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pectobacterium_atrosepticum_SCRI1043 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Sodalis_glossinidius_str._'morsitans' 0
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 1
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 1
Erwinia_sp._Ejp617 1
Erwinia_billingiae_Eb661 1
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 1
Escherichia_blattae_DSM_4481 1
Cronobacter_turicensis_z3032 1
Cronobacter_sakazakii_ES15 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Shigella_sonnei_Ss046 2
Shigella_flexneri_5_str._8401 1
Shigella_dysenteriae_Sd197 0
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 1
Klebsiella_variicola_At-22 1
Klebsiella_pneumoniae_NTUH-K2044 1
Enterobacter_aerogenes_KCTC_2190 1
Escherichia_fergusonii_ATCC_35469 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2
Enterobacter_sp._R4-368 1
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 2
Azotobacter_vinelandii_DJ 3
Pseudomonas_sp._TKP 4
Pseudomonas_sp._UW4 3
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 4
Pseudomonas_entomophila_L48 3
Pseudomonas_syringae_pv._tomato_str._DC3000 2
Pseudomonas_stutzeri_A1501 5
Pseudomonas_fulva_12-X 3
Pseudomonas_putida_F1 4
Pseudomonas_protegens_Pf-5 3
Pseudomonas_fluorescens_SBW25 5
Pseudomonas_mendocina_ymp 5
Pseudomonas_aeruginosa_UCBPP-PA14 4
Pseudomonas_sp._VLB120 4
Psychrobacter_sp._G 0
Psychrobacter_cryohalolentis_K5 0
Acinetobacter_oleivorans_DR1 2
Acinetobacter_calcoaceticus_PHEA-2 2
Acinetobacter_baumannii_ATCC_17978 2
Acinetobacter_sp._ADP1 1
Methylophaga_sp._JAM1 1
Thiomicrospira_crunogena_XCL-2 1
halophilic_archaeon_DL31 1
Methanosaeta_thermophila_PT 1
Methanosaeta_concilii_GP6 0
Methanosalsum_zhilinae_DSM_4017 1
Methanohalobium_evestigatum_Z-7303 0
Methanococcoides_burtonii_DSM_6242 5
Methanosarcina_acetivorans_C2A 4
Methanosarcina_mazei_Go1 3
Methanosarcina_barkeri_str._Fusaro 1
Methanohalophilus_mahii_DSM_5219 1
Methanosphaerula_palustris_E1-9c 4
Methanospirillum_hungatei_JF-1 0
Methanoplanus_petrolearius_DSM_11571 0
Salinarchaeum_sp._Harcht-Bsk1 3
Halopiger_xanaduensis_SH-6 3
Haloterrigena_turkmenica_DSM_5511 6
Natrinema_sp._J7-2 1
Halorubrum_lacusprofundi_ATCC_49239 2
Haloquadratum_walsbyi_DSM_16790 1
Halogeometricum_borinquense_DSM_11551 1
Haloferax_mediterranei_ATCC_33500 1
Haloferax_volcanii_DS2 3
Halomicrobium_mukohataei_DSM_12286 3
Halorhabdus_utahensis_DSM_12940 6
Natronomonas_pharaonis_DSM_2160 1
Haloarcula_hispanica_ATCC_33960 3
Haloarcula_marismortui_ATCC_43049 4
Methanococcus_vannielii_SB 1

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Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Chroococcidiopsis_thermalis_PCC_7203 4
Chamaesiphon_minutus_PCC_6605 4
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._CC9902 1
Synechococcus_sp._PCC_7002 1
Crinalium_epipsammum_PCC_9333 4
Oscillatoria_nigro-viridis_PCC_7112 3
Oscillatoria_acuminata_PCC_6304 5
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 3
Cyanothece_sp._PCC_7424 3
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 2
Cylindrospermum_stagnale_PCC_7417 4
Anabaena_cylindrica_PCC_7122 3
Adlercreutzia_equolifaciens_DSM_19450 0
Frankia_sp._EuI1c 1
Streptomyces_venezuelae_ATCC_10712 1
Actinoplanes_friuliensis_DSM_7358 4
Clavibacter_michiganensis_subsp._sepedonicus 2
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Dehalococcoides_mccartyi_GY50 2
Dehalococcoides_mccartyi_DCMB5 4
Dehalococcoides_mccartyi_BTF08 2
Dehalococcoides_sp._GT 2
Dehalococcoides_sp._VS 1
Dehalococcoides_sp._CBDB1 5
Chthonomonas_calidirosea_T49 1
Deinococcus_peraridilitoris_DSM_19664 1
Eubacterium_siraeum_V10Sc8a 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Ruminococcus_champanellensis_18P13 2
Sulfobacillus_acidophilus_TPY 2
Clostridium_acidurici_9a 2
Desulfosporosinus_meridiei_DSM_13257 7
Desulfitobacterium_dichloroeliminans_LMG_P-21439 3
Desulfitobacterium_hafniense_DCB-2 3
Desulfotomaculum_gibsoniae_DSM_7213 2
Clostridium_difficile_BI1 2
Clostridium_difficile_R20291 2
Clostridium_difficile_CD196 2
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Clostridium_saccharobutylicum_DSM_13864 5
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 4
Clostridium_kluyveri_NBRC_12016 1
Clostridium_perfringens_SM101 3
Clostridium_perfringens_str._13 3
Clostridium_pasteurianum_BC1 4
Clostridium_botulinum_H04402_065 2
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_F_str._230613 2
Clostridium_botulinum_F_str._Langeland 2
Clostridium_botulinum_E3_str._Alaska_E43 2
Clostridium_botulinum_B1_str._Okra 2
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A2_str._Kyoto 2
Clostridium_botulinum_A3_str._Loch_Maree 2
Clostridium_botulinum_A_str._Hall 2
Clostridium_botulinum_A_str._ATCC_19397 2
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1
Halobacteroides_halobius_DSM_5150 1
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_casseliflavus_EC20 1
Enterococcus_faecalis_str._Symbioflor_1 1
Enterococcus_faecalis_D32 1
Enterococcus_faecalis_OG1RF 1
Enterococcus_faecalis_V583 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_LOCK900 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 1
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 1
Lactobacillus_brevis_KB290 1
Lactococcus_garvieae_Lg2 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_KF147 1
Lactococcus_lactis_subsp._lactis_Il1403 1
Lactococcus_lactis_subsp._cremoris_KW2 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1
Lactococcus_lactis_subsp._cremoris_A76 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Lactococcus_lactis_subsp._cremoris_SK11 1
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_intermedius_B196 1
Streptococcus_intermedius_C270 1
Streptococcus_anginosus_C238 1
Streptococcus_anginosus_C1051 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 2
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 2
Streptococcus_lutetiensis_033 2
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_oligofermentans_AS_1.3089 1
Streptococcus_iniae_SF1 1
Streptococcus_parasanguinis_FW213 1
Streptococcus_pyogenes_HSC5 1
Streptococcus_pyogenes_A20 1
Streptococcus_pyogenes_MGAS1882 1
Streptococcus_pyogenes_MGAS15252 1
Streptococcus_pyogenes_Alab49 1
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS2096 1
Streptococcus_pyogenes_MGAS9429 1
Streptococcus_pyogenes_MGAS6180 1
Streptococcus_pyogenes_NZ131 1
Streptococcus_pyogenes_MGAS8232 1
Streptococcus_pyogenes_MGAS10394 1
Streptococcus_pyogenes_MGAS315 1
Streptococcus_pyogenes_SSI-1 1
Streptococcus_pyogenes_M1_476 1
Streptococcus_pyogenes_MGAS5005 1
Streptococcus_pyogenes_M1_GAS 1
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 1
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 1
Streptococcus_pneumoniae_SPN994038 1
Streptococcus_pneumoniae_SPN034183 1
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_OXC141 1
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_AP200 1
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_pneumoniae_TCH8431/19A 1
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_G54 1
Streptococcus_pneumoniae_JJA 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 1
Streptococcus_pneumoniae_Taiwan19F-14 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_agalactiae_ILRI112 2
Streptococcus_agalactiae_ILRI005 2
Streptococcus_agalactiae_09mas018883 2
Streptococcus_agalactiae_2-22 1
Streptococcus_agalactiae_SA20-06 2
Streptococcus_agalactiae_GD201008-001 2
Streptococcus_agalactiae_NEM316 2
Streptococcus_agalactiae_2603V/R 2
Streptococcus_mutans_GS-5 1
Streptococcus_mutans_LJ23 1
Streptococcus_mutans_UA159 1
Streptococcus_thermophilus_MN-ZLW-002 1
Streptococcus_thermophilus_JIM_8232 1
Streptococcus_thermophilus_ND03 1
Streptococcus_thermophilus_CNRZ1066 1
Streptococcus_thermophilus_LMG_18311 1
Streptococcus_suis_T15 2
Streptococcus_suis_TL13 1
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_D12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_suis_05ZYH33 1
Streptococcus_salivarius_CCHSS3 1
Streptococcus_salivarius_JIM8777 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2
Thermobacillus_composti_KWC4 1
Paenibacillus_sp._Y412MC10 2
Paenibacillus_mucilaginosus_KNP414 3
Paenibacillus_mucilaginosus_K02 3
Paenibacillus_larvae_subsp._larvae_DSM_25430 2
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Geobacillus_sp._C56-T3 2
Geobacillus_sp._Y412MC52 2
Geobacillus_sp._Y412MC61 2
Amphibacillus_xylanus_NBRC_15112 2
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2
Bacillus_amyloliquefaciens_LFB112 2
Bacillus_amyloliquefaciens_CC178 2
Bacillus_amyloliquefaciens_Y2 2
Bacillus_amyloliquefaciens_IT-45 2
Bacillus_amyloliquefaciens_XH7 2
Bacillus_amyloliquefaciens_LL3 2
Bacillus_amyloliquefaciens_TA208 2
Bacillus_amyloliquefaciens_DSM_7 2
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 2
Bacillus_subtilis_XF-1 2
Bacillus_subtilis_QB928 2
Bacillus_subtilis_BSn5 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2
Bacillus_subtilis_subsp._spizizenii_str._W23 2
Bacillus_subtilis_subsp._natto_BEST195 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2
Bacillus_infantis_NRRL_B-14911 3
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_toyonensis_BCT-7112 1
Bacillus_thuringiensis_HD-771 1
Bacillus_thuringiensis_HD-789 1
Bacillus_thuringiensis_MC28 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_BMB171 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 1
Bacillus_cereus_AH187 1
Bacillus_cereus_B4264 1
Bacillus_cereus_G9842 1
Bacillus_cereus_Q1 1
Bacillus_cereus_F837/76 1
Bacillus_cereus_NC7401 1
Bacillus_cereus_E33L 1
Bacillus_cereus_ATCC_14579 2
Bacillus_cereus_ATCC_10987 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._Sterne 1
Bacillus_megaterium_WSH-002 5
Bacillus_megaterium_QM_B1551 4
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_pasteuri_SP1 1
Staphylococcus_lugdunensis_N920143 1
Staphylococcus_warneri_SG1 1
Staphylococcus_epidermidis_ATCC_12228 1
Staphylococcus_aureus_CA-347 1
Staphylococcus_aureus_Bmb9393 1
Staphylococcus_aureus_M1 1
Staphylococcus_aureus_08BA02176 1
Staphylococcus_aureus_ST228/18412 1
Staphylococcus_aureus_ST228/18341 1
Staphylococcus_aureus_ST228/16125 1
Staphylococcus_aureus_ST228/16035 1
Staphylococcus_aureus_ST228/15532 1
Staphylococcus_aureus_ST228/10497 1
Staphylococcus_aureus_ST228/10388 1
Staphylococcus_aureus_04-02981 1
Staphylococcus_aureus_RF122 1
Staphylococcus_aureus_subsp._aureus_Z172 1
Staphylococcus_aureus_subsp._aureus_6850 1
Staphylococcus_aureus_subsp._aureus_SA957 1
Staphylococcus_aureus_subsp._aureus_CN1 1
Staphylococcus_aureus_subsp._aureus_SA40 1
Staphylococcus_aureus_subsp._aureus_11819-97 1
Staphylococcus_aureus_subsp._aureus_M013 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1
Staphylococcus_aureus_subsp._aureus_VC40 1
Staphylococcus_aureus_subsp._aureus_T0131 1
Staphylococcus_aureus_subsp._aureus_LGA251 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1
Staphylococcus_aureus_subsp._aureus_ED133 1
Staphylococcus_aureus_subsp._aureus_ED98 1
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_55/2053 1
Staphylococcus_aureus_subsp._aureus_TCH60 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1
Staphylococcus_aureus_subsp._aureus_71193 1
Staphylococcus_aureus_subsp._aureus_S0385 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1
Staphylococcus_aureus_subsp._aureus_Mu3 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1
Staphylococcus_aureus_subsp._aureus_JH9 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1
Staphylococcus_aureus_subsp._aureus_MW2 1
Staphylococcus_aureus_subsp._aureus_N315 1
Staphylococcus_aureus_subsp._aureus_Mu50 1
Staphylococcus_aureus_subsp._aureus_COL 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1
Salinibacter_ruber_DSM_13855 3
Echinicola_vietnamensis_DSM_17526 2
Emticicia_oligotrophica_DSM_17448 0
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 3
Bacteroides_fragilis_NCTC_9343 3
Psychroflexus_torquis_ATCC_700755 2
Singulisphaera_acidiphila_DSM_18658 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 4
Spirochaeta_thermophila_DSM_6578 2
Thermotoga_maritima_MSB8 1
Hydrogenobacter_thermophilus_TK-6 1
Leptospirillum_ferriphilum_ML-04 3
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Bdellovibrio_exovorus_JSS 1
Bdellovibrio_bacteriovorus_str._Tiberius 4
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Desulfocapsa_sulfexigens_DSM_10523 8
Desulfobacula_toluolica_Tol2 9
Lawsonia_intracellularis_N343 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 22
Desulfovibrio_vulgaris_RCH1 8
Desulfovibrio_vulgaris_str._'Miyazaki_F' 7
Desulfovibrio_vulgaris_str._Hildenborough 7
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 12
Desulfovibrio_desulfuricans_ND132 7
Geobacter_sp._M18 7
Geobacter_sulfurreducens_PCA 8
Sorangium_cellulosum_So0157-2 4
Anaeromyxobacter_sp._K 5
Anaeromyxobacter_dehalogenans_2CP-C 5
Myxococcus_stipitatus_DSM_14675 5
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 2
Ralstonia_solanacearum_FQY_4 3
Ralstonia_solanacearum_Po82 3
Ralstonia_solanacearum_PSI07 3
Ralstonia_solanacearum_CMR15 3
Ralstonia_solanacearum_GMI1000 2
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 2
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 2
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 3
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 2
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Alicycliphilus_denitrificans_BC 5
Variovorax_paradoxus_B4 3
Variovorax_paradoxus_EPS 3
Taylorella_asinigenitalis_14/45 1
Taylorella_equigenitalis_14/56 1
Taylorella_equigenitalis_ATCC_35865 1
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 2
Bordetella_bronchiseptica_253 2
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 2
Nitrosomonas_sp._AL212 4
Sulfuricella_denitrificans_skB26 4
Caulobacter_crescentus_CB15 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1
Zymomonas_mobilis_subsp._mobilis_CP4 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Phaeobacter_gallaeciensis_DSM_17395 0
Phaeobacter_gallaeciensis_DSM_26640 0
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 0
Octadecabacter_arcticus_238 0
Rhodobacter_sphaeroides_KD131 2
Rhodobacter_sphaeroides_ATCC_17025 2
Rhodobacter_sphaeroides_2.4.1 2
Paracoccus_aminophilus_JCM_7686 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 15
Rhodospirillum_rubrum_ATCC_11170 4
Gluconacetobacter_diazotrophicus_PAl_5 2
Acetobacter_pasteurianus_386B 0
Acetobacter_pasteurianus_IFO_3283-12 0
Acetobacter_pasteurianus_IFO_3283-01-42C 0
Acetobacter_pasteurianus_IFO_3283-32 0
Acetobacter_pasteurianus_IFO_3283-26 0
Acetobacter_pasteurianus_IFO_3283-22 0
Acetobacter_pasteurianus_IFO_3283-07 0
Acetobacter_pasteurianus_IFO_3283-03 0
Micavibrio_aeruginosavorus_EPB 1
Methylobacterium_extorquens_DM4 3
Methylobacterium_extorquens_PA1 3
Brucella_ceti_TE10759-12 2
Brucella_ceti_TE28753-12 0
Brucella_canis_HSK_A52141 2
Brucella_suis_VBI22 2
Brucella_suis_1330 2
Brucella_suis_1330 2
Brucella_melitensis_NI 2
Brucella_melitensis_M5-90 2
Brucella_melitensis_M28 2
Brucella_melitensis_bv._1_str._16M 1
Brucella_abortus_A13334 2
Brucella_melitensis_biovar_Abortus_2308 2
Brucella_abortus_bv._1_str._9-941 2
Sinorhizobium_fredii_USDA_257 3
Sinorhizobium_fredii_HH103 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 2
Sinorhizobium_meliloti_SM11 2
Sinorhizobium_meliloti_BL225C 2
Sinorhizobium_meliloti_1021 2
Rhizobium_etli_CFN_42 4
Rhizobium_etli_bv._mimosae_str._Mim1 4
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 4
Rhizobium_leguminosarum_bv._trifolii_WSM1325 4
Liberibacter_crescens_BT-1 1
Candidatus_Liberibacter_solanacearum_CLso-ZC1 1
Candidatus_Liberibacter_americanus_str._Sao_Paulo 1
Candidatus_Liberibacter_asiaticus_str._gxpsy 1
Mesorhizobium_australicum_WSM2073 0
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 2
Oligotropha_carboxidovorans_OM5 2
Rhodopseudomonas_palustris_DX-1 3
Rhodopseudomonas_palustris_TIE-1 3
Rhodopseudomonas_palustris_HaA2 3
Rhodopseudomonas_palustris_BisB5 3
Rhodopseudomonas_palustris_BisB18 4
Rhodopseudomonas_palustris_CGA009 3
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 3
Bradyrhizobium_oligotrophicum_S58 3
Bradyrhizobium_japonicum_USDA_6 5
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1
Bartonella_quintana_RM-11 1
Simiduia_agarivorans_SA1_=_DSM_21679 8
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 0
Mannheimia_haemolytica_USMARC_2286 1
Mannheimia_haemolytica_M42548 1
Mannheimia_haemolytica_D174 1
Mannheimia_haemolytica_D171 1
Mannheimia_haemolytica_D153 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1
Pasteurella_multocida_36950 1
Pasteurella_multocida_subsp._multocida_str._HN06 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1
Haemophilus_parasuis_ZJ0906 0
Haemophilus_influenzae_KR494 1
Haemophilus_influenzae_F3047 1
Haemophilus_influenzae_F3031 1
Haemophilus_influenzae_10810 1
Haemophilus_influenzae_PittGG 1
Haemophilus_influenzae_86-028NP 1
Haemophilus_influenzae_R2866 1
Haemophilus_influenzae_R2846 1
Haemophilus_influenzae_Rd_KW20 1
Actinobacillus_suis_H91-0380 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1
Aeromonas_hydrophila_ML09-119 1
Vibrio_fischeri_ES114 1
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 2
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_nigripulchritudo_VibrioScope 2
Vibrio_vulnificus_CMCP6 2
Vibrio_vulnificus_YJ016 2
Vibrio_cholerae_LMA3984-4 2
Vibrio_cholerae_M66-2 2
Vibrio_cholerae_O395 2
Vibrio_cholerae_IEC224 2
Vibrio_cholerae_O1_str._2010EL-1786 2
Vibrio_cholerae_MJ-1236 2
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 2
Idiomarina_loihiensis_GSL_199 1
Shewanella_sp._W3-18-1 3
Shewanella_sp._ANA-3 2
Shewanella_baltica_BA175 3
Shewanella_baltica_OS678 3
Shewanella_baltica_OS117 3
Shewanella_baltica_OS223 3
Shewanella_baltica_OS195 3
Shewanella_baltica_OS155 3
Shewanella_sp._MR-7 2
Shewanella_putrefaciens_200 3
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 2
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 2
Alteromonas_macleodii_str._'Ionian_Sea_U8' 2
Alteromonas_macleodii_str._'Ionian_Sea_U7' 2
Alteromonas_macleodii_str._'Ionian_Sea_U4' 2
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 2
Alteromonas_macleodii_str._'English_Channel_615' 2
Alteromonas_macleodii_AltDE1 2
Alteromonas_macleodii_str._'English_Channel_673' 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2
Alteromonas_macleodii_str._'Black_Sea_11' 2
Alteromonas_macleodii_ATCC_27126 2
Alcanivorax_dieselolei_B5 2
Thalassolituus_oleivorans_MIL-1 7
Stenotrophomonas_maltophilia_D457 2
Stenotrophomonas_maltophilia_JV3 2
Stenotrophomonas_maltophilia_R551-3 2
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_Temecula1 1
Xylella_fastidiosa_9a5c 1
Xanthomonas_citri_subsp._citri_Aw12879 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2
Xanthomonas_axonopodis_Xac29-1 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 2
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 2
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2
Xanthomonas_campestris_pv._raphani_756C 2
Xanthomonas_campestris_pv._campestris_str._8004 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2
Spiribacter_salinus_M19-40 2
Thioalkalivibrio_nitratireducens_DSM_14787 3
Thioflavicoccus_mobilis_8321 1
Coxiella_burnetii_CbuK_Q154 0
Coxiella_burnetii_CbuG_Q212 0
Coxiella_burnetii_RSA_331 0
Coxiella_burnetii_RSA_493 0
Legionella_pneumophila_str._Paris 1
Legionella_pneumophila_str._Lens 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Legionella_pneumophila_2300/99_Alcoy 1
Proteus_mirabilis_BB2000 1
Morganella_morganii_subsp._morganii_KT 1
Edwardsiella_tarda_C07-087 2
Edwardsiella_tarda_FL6-60 2
Rahnella_aquatilis_HX2 2
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 1
Yersinia_pseudotuberculosis_IP_32953 1
Yersinia_pestis_biovar_Microtus_str._91001 1
Yersinia_pestis_A1122 1
Yersinia_pestis_Z176003 1
Yersinia_pestis_D182038 1
Yersinia_pestis_D106004 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1
Yersinia_pestis_Nepal516 1
Yersinia_pestis_Antiqua 1
Yersinia_pestis_Angola 1
Yersinia_pestis_CO92 1
Yersinia_pestis_KIM10+ 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Serratia_sp._AS13 1
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 1
Serratia_marcescens_FGI94 1
Serratia_marcescens_WW4 1
Serratia_liquefaciens_ATCC_27592 1
Dickeya_dadantii_Ech586 2
Dickeya_dadantii_3937 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 1
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_CMCC_45402 1
Cronobacter_sakazakii_SP291 1
Cronobacter_sakazakii_ATCC_BAA-894 1
Raoultella_ornithinolytica_B6 1
Shigella_sonnei_53G 2
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 2
Klebsiella_pneumoniae_342 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 1
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 2
Escherichia_coli_JJ1886 2
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 2
Escherichia_coli_O7:K1_str._CE10 2
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 2
Escherichia_coli_str._'clone_D_i2' 2
Escherichia_coli_str._'clone_D_i14' 2
Escherichia_coli_UM146 2
Escherichia_coli_042 2
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 2
Escherichia_coli_UMNK88 2
Escherichia_coli_O83:H1_str._NRG_857C 2
Escherichia_coli_ABU_83972 2
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 2
Escherichia_coli_ED1a 2
Escherichia_coli_IAI39 2
Escherichia_coli_UMN026 2
Escherichia_coli_55989 1
Escherichia_coli_S88 2
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 2
Escherichia_coli_DH1 2
Escherichia_coli_ATCC_8739 2
Escherichia_coli_BL21(DE3) 2
Escherichia_coli_BL21(DE3) 2
Escherichia_coli_SMS-3-5 2
Escherichia_coli_SE15 2
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 2
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 2
Escherichia_coli_536 2
Escherichia_coli_HS 2
Escherichia_coli_ETEC_H10407 2
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_CFT073 2
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 2
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 2
Escherichia_coli_BW2952 2
Escherichia_coli_str._K-12_substr._MG1655 2
Escherichia_coli_str._K-12_substr._W3110 2
Escherichia_coli_str._K-12_substr._DH10B 2
Escherichia_coli_B_str._REL606 2
Enterobacter_cloacae_SCF1 2
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Azotobacter_vinelandii_CA6 3
Azotobacter_vinelandii_CA 3
Pseudomonas_denitrificans_ATCC_13867 3
Pseudomonas_syringae_pv._phaseolicola_1448A 3
Pseudomonas_syringae_pv._syringae_B728a 3
Pseudomonas_stutzeri_CCUG_29243 4
Pseudomonas_stutzeri_DSM_10701 4
Pseudomonas_stutzeri_DSM_4166 3
Pseudomonas_stutzeri_RCH2 4
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 3
Pseudomonas_monteilii_SB3101 4
Pseudomonas_monteilii_SB3078 4
Pseudomonas_putida_H8234 4
Pseudomonas_putida_HB3267 4
Pseudomonas_putida_NBRC_14164 4
Pseudomonas_putida_DOT-T1E 5
Pseudomonas_putida_S16 4
Pseudomonas_putida_BIRD-1 4
Pseudomonas_putida_W619 4
Pseudomonas_putida_ND6 4
Pseudomonas_putida_KT2440 4
Pseudomonas_putida_GB-1 4
Pseudomonas_protegens_CHA0 3
Pseudomonas_poae_RE*1-1-14 4
Pseudomonas_fluorescens_F113 4
Pseudomonas_fluorescens_A506 4
Pseudomonas_fluorescens_R124 3
Pseudomonas_fluorescens_Pf0-1 4
Pseudomonas_resinovorans_NBRC_106553 3
Pseudomonas_mendocina_NK-01 5
Pseudomonas_aeruginosa_SCV20265 4
Pseudomonas_aeruginosa_MTB-1 4
Pseudomonas_aeruginosa_LES431 4
Pseudomonas_aeruginosa_RP73 4
Pseudomonas_aeruginosa_B136-33 4
Pseudomonas_aeruginosa_PA1R 4
Pseudomonas_aeruginosa_PA1 4
Pseudomonas_aeruginosa_DK2 4
Pseudomonas_aeruginosa_NCGM2.S1 4
Pseudomonas_aeruginosa_M18 4
Pseudomonas_aeruginosa_LESB58 4
Pseudomonas_aeruginosa_PA7 4
Pseudomonas_aeruginosa_PAO1 4
Acinetobacter_genomosp._13TU__RUH2624 2
Acinetobacter_sp.__SH024 2
Acinetobacter_calcoaceticus_ruh2202 2
Acinetobacter_baumannii_ZW85-1 2
Acinetobacter_baumannii_TYTH-1 2
Acinetobacter_baumannii_BJAB0868 2
Acinetobacter_baumannii_BJAB0715 2
Acinetobacter_baumannii_BJAB07104 2
Acinetobacter_baumannii_TCDC-AB0715 2
Acinetobacter_baumannii_D1279779 2
Acinetobacter_baumannii_MDR-TJ 2
Acinetobacter_baumannii_1656-2 2
Acinetobacter_baumannii__ATCC_19606 2
Acinetobacter_baumannii_AB307-0294 2
Acinetobacter_baumannii_AYE 2
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 2
Acinetobacter_baumannii_AB0057 2
Acinetobacter_baumannii_ACICU 2
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 0
Acinetobacter_lwoffii__SH145 2
Methylophaga_sp._JAM7 1
Methanomethylovorans_hollandica_DSM_15978 0
Methanolobus_psychrophilus_R15 2
Methanosarcina_mazei_Tuc01 3
Halovivax_ruber_XH-70 3
Natrinema_pellirubrum_DSM_15624 3
Halorhabdus_tiamatea_SARL4B 2
Natronomonas_moolapensis_8.8.11 1
Haloarcula_hispanica_N601 3

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2
NCBI_plasmid_sequences_(Plasmids) 44
NCBI_viral_sequences_(Viral) 0
Protein_Data_Bank_(all_PDB_sequenc) 2
TargetDB__(Targets) 77
STRING_v9.0.5_(STRING) 1307
Protozoadb_2010_08_(Protozoadb) 1
Uniprot_2018_03_genome 265670
NCBI_2017_08_genome 106602
UniProt__viral_sequences_(Viral) 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.