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Domain combinations for _gap_,55785,55781,55785,47384,55874 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Microcoleus_sp._PCC_7113 1
Calothrix_sp._PCC_7507 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Acetobacterium_woodii_DSM_1030 0
Opitutus_terrae_PB90-1 0
Flexistipes_sinusarabici_DSM_4947 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Desulfovibrio_magneticus_RS-1 0
Pelobacter_propionicus_DSM_2379 0
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Magnetospirillum_magneticum_AMB-1 1
Azospirillum_lipoferum_4B 0
Azospirillum_sp._B510 0
Hyphomicrobium_denitrificans_ATCC_51888 1
Thiocystis_violascens_DSM_198 0
Pseudomonas_fulva_12-X 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Methanohalophilus_mahii_DSM_5219 2
Halobacterium_salinarum_R1 1
Halobacterium_sp._NRC-1 1

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Strains
Genome     Number
Chamaesiphon_minutus_PCC_6605 1
Crinalium_epipsammum_PCC_9333 1
Cyanothece_sp._PCC_7425 0
Stanieria_cyanosphaera_PCC_7437 1
Chthonomonas_calidirosea_T49 0
Echinicola_vietnamensis_DSM_17526 0
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 1
Thioflavicoccus_mobilis_8321 1
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PAO1 0

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 0
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 2960
NCBI_2017_08_genome 122

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