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Domain combinations for _gap_,55785,55781,55785,55073 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55073 - Nucleotide cyclase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Synechocystis_sp._PCC_6803 0
Microcoleus_sp._PCC_7113 1
Halothece_sp._PCC_7418 0
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Nostoc_sp._PCC_7107 1
Syntrophobotulus_glycolicus_DSM_8271 0
Thermodesulfobium_narugense_DSM_14796 1
Sphaerochaeta_pleomorpha_str._Grapes 0
Thermodesulfobacterium_sp._OPB45 0
Deferribacter_desulfuricans_SSM1 0
Sulfurihydrogenibium_azorense_Az-Fu1 0
Leptospirillum_ferrooxidans_C2-3 0
Acidithiobacillus_ferrivorans_SS3 0
Sulfuricurvum_kujiense_DSM_16994 0
Nitratiruptor_sp._SB155-2 0
Azoarcus_sp._BH72 0
Aromatoleum_aromaticum_EbN1 0
Leptothrix_cholodnii_SP-6 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 0
Rhodoferax_ferrireducens_T118 0
Acidovorax_sp._JS42 0
Janthinobacterium_sp._Marseille 0
Methylotenera_versatilis_301 0
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Rhodospirillum_rubrum_F11 0
Methylocella_silvestris_BL2 0
Saccharophagus_degradans_2-40 0
Cellvibrio_japonicus_Ueda107 0
Kangiella_koreensis_DSM_16069 0
Hahella_chejuensis_KCTC_2396 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Allochromatium_vinosum_DSM_180 0
Thiocystis_violascens_DSM_198 0

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Strains
Genome     Number
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._JA-2-3B'a(2-13) 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Leptospirillum_ferriphilum_ML-04 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Rhodospirillum_rubrum_ATCC_11170 0

Others
Genome     Number
TargetDB__(Targets) 0
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1022
NCBI_2017_08_genome 69

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