SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,55785,_gap_,55781,47384,55874 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcoleus_sp._PCC_7113 1
Nostoc_punctiforme_PCC_73102 0
Deinococcus_gobiensis_I-0 2
Geobacter_daltonii_FRC-32 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1

Strains
Genome     Number
Crinalium_epipsammum_PCC_9333 0
Anabaena_cylindrica_PCC_7122 0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 1
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 34
Uniprot_2018_03_genome 820

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