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  Home > SCOP hierarchy > Domain combination - _gap_,55811

Domain combinations for _gap_,55811 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55811 - Nudix

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   12
Pan_troglodytes_76_2.1.4   (Chimpanzee)   5
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   5
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6
Papio_anubis_76   (Olive baboon)   4
Macaca_mulatta_76_1   (Rhesus monkey)   6
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   5
Otolemur_garnettii_76_3   (Small-eared galago)   4
Microcebus_murinus_76_1   (Gray mouse lemur)   3
Rattus_norvegicus_76_5.0   (Norway rat)   5
Mus_musculus_76_38   (House mouse)   14
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6
Cavia_porcellus_76_3   (Domestic guinea pig)   4
Oryctolagus_cuniculus_76_2   (Rabbit)   5
Ochotona_princeps_76   (American pika)   3
Tupaia_belangeri_76   (Northern tree shrew)   3
Sus_scrofa_76_10.2   (Pig)   4
Bos_taurus_76_3.1   (Cattle)   5
Ovis_aries_76_3.1   (Sheep)   5
Vicugna_pacos_76_1   (Alpaca)   3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_76_1   (Giant panda)   5
Canis_familiaris_76_3.1   (Dog)   8
Felis_catus_76_6.2   (Domestic cat)   4
Equus_caballus_76_2   (Horse)   7
Myotis_lucifugus_76_2.0   (Little brown bat)   5
Pteropus_vampyrus_76_1   (Large flying fox)   3
Sorex_araneus_76_1   (European shrew)   3
Erinaceus_europaeus_76   (Western European hedgehog)   4
Procavia_capensis_76_1   (Cape rock hyrax)   5
Loxodonta_africana_76_3   (African savanna elephant)   4
Echinops_telfairi_76   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   5
Ornithorhynchus_anatinus_76_5   (Platypus)   3
Saccoglossus_kowalevskii_v3.0 9
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   3
Gallus_gallus_76_4   (Chicken)   4
Anas_platyrhynchos_76_1.0   (Mallard)   3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   8
Anolis_carolinensis_76_2.0   (Green anole)   6
Xenopus_laevis_   (African clawed frog)   12
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   6
Latimeria_chalumnae_76_1   (Coelacanth)   8
Lepisosteus_oculatus_76   (Spotted gar)   6
Gadus_morhua_76_1   (Atlantic cod)   6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   7
Takifugu_rubripes_76_4   (Torafugu)   7
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8
Oryzias_latipes_76_1   (Japanese medaka)   7
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   7
Poecilia_formosa_76   (Amazon molly)   10
Oreochromis_niloticus_76_1.0   (Nile tilapia)   9
Astyanax_mexicanus_76   (Mexican tetra)   8
Danio_rerio_76_9   (Zebrafish)   14
Oikopleura_dioica 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   4
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   7
Adineta_vaga 17
Octopus_bimaculoides_280 7
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   5
Helobdella_robusta_ 1
Capitella_sp._I_ 8
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3
Heliconius_melpomene_   (Postman butterfly)   2
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3
Atta_cephalotes_v1.1 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   6
Drosophila_grimshawi_1.3 6
Drosophila_willistoni_1.3 5
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 5
Drosophila_suzukii 2
Drosophila_yakuba_1.3 4
Drosophila_simulans_1.3 5
Drosophila_sechellia_1.3 4
Drosophila_melanogaster_76_5   (Fruit fly)   6
Drosophila_erecta_1.3 4
Drosophila_ananassae_1.3 4
Drosophila_virilis_1.2 5
Drosophila_mojavensis_1.3 5
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6
Anopheles_darlingi_22   (American malaria mosquito)   3
Anopheles_gambiae_49_3j   (African malaria mosquito)   6
Tribolium_castaneum_3.0   (Red flour beetle)   4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2
Acyrthosiphon_pisum_   (Pea aphid)   6
Rhodnius_prolixus_22 5
Daphnia_pulex_   (Common water flea)   6
Strigamia_maritima_22 3
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   7
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   2
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 4
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_japonica_ 7
Caenorhabditis_brenneri_ 6
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   5
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 3
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 3
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   4
Acropora_digitifera_v1.0 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   7
Hydra_vulgaris 4
Amphimedon_queenslandica 5
Trichoplax_adhaerens_ 4
Proterospongia_sp._ATCC_50818_ 8
Monosiga_brevicollis_ 5
Sphaeroforma_arctica_JP610_ 3
Capsaspora_owczarzaki_ATCC_30864_ 4
Conidiobolus_coronatus_NRRL28638_v1.0 3
Mortierella_verticillata_NRRL_6337_ 8
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 6
Mucor_circinelloides_ 4
Rhizomucor_miehei_CAU432_ 4
Malassezia_globosa_CBS_7966_ 6
Sporisorium_reilianum_22 1
Ustilago_maydis_ 2
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 2
Rhodotorula_graminis_WP1_v1.0 3
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 3
Wallemia_sebi_v1.0 2
Sphaerobolus_stellatus_v1.0 4
Piloderma_croceum_F_1598_v1.0 4
Serpula_lacrymans_var._lacrymans_S7.9_ 3
Coniophora_puteana 3
Hydnomerulius_pinastri_v2.0 4
Paxillus_rubicundulus_Ve08.2h10_v1.0 6
Pisolithus_microcarpus_441_v1.0 4
Pisolithus_tinctorius_Marx_270_v1.0 6
Scleroderma_citrinum_Foug_A_v1.0 4
Coprinopsis_cinerea_okayama7_130_v3 4
Pleurotus_ostreatus_   (Oyster mushroom)   4
Amanita_thiersii_Skay4041_v1.0 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3
Galerina_marginata_v1.0 4
Hebeloma_cylindrosporum_h7_v2.0 4
Laccaria_bicolor_S238N-H82_ 5
Agaricus_bisporus_var._bisporus_ 2
Schizophyllum_commune_ 3
Stereum_hirsutum_FP-91666_SS1__v1.0 3
Heterobasidion_annosum_ 6
Gloeophyllum_trabeumv1.0 2
Punctularia_strigosozonata_v1.0 3
Sebacina_vermifera_MAFF_305830_v1.0 4
Fomitiporia_mediterranea_v1.0 4
Tulasnella_calospora_AL13/4D_v1.0 4
Postia_placenta_ 8
Wolfiporia_cocos_MD-104_SS10__v1.0 3
Fomitopsis_pinicolav1.0 4
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 3
Trametes_versicolor_v1.0 3
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 6
Apiospora_montagnei_NRRL_25634_v1.0 7
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 8
Sporotrichum_thermophile_ATCC_42464_ 4
Thielavia_terrestris_NRRL_8126_ 4
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 4
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 5
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 2
Verticillium_dahliae_VdLs.17_ 5
Acremonium_alcalophilumv_1.0 6
Glomerella_graminicola_22 5
Fusarium_graminearum_ 5
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 5
Fusarium_verticillioides_7600_ 5
Trichoderma_asperellum_CBS_433.97_v1.0 6
Trichoderma_atroviride_ 7
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 5
Trichoderma_virens_Gv29-8_ 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5
Trichoderma_harzianum_CBS_226.95_v1.0 8
Amorphotheca_resinae_v1.0   (Creosote fungus)   4
Botrytis_cinerea_B05.10_ 5
Sclerotinia_sclerotiorum_ 5
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 3
Leptosphaeria_maculans_22 5
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 3
Pyrenophora_tritici-repentis_ 3
Stagonospora_nodorum_ 4
Mycosphaerella_graminicola_IPO323_ 6
Zasmidium_cellare_ATCC_36951_v1.0 6
Dothistroma_septosporum 6
Septoria_musiva_v1.0 5
Mycosphaerella_fijiensis_CIRAD86_ 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4
Paracoccidioides_brasiliensis_Pb18_ 5
Coccidioides_posadasii_RMSCC_3488_ 6
Coccidioides_immitis_RS_ 6
Ajellomyces_dermatitidis_SLH14081_ 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 4
Microsporum_canis_CBS_113480_ 4
Trichophyton_equinum_CBS_127.97_ 5
Trichophyton_verrucosum_HKI_0517_ 6
Arthroderma_benhamiae_CBS_112371_ 4
Trichophyton_tonsurans_CBS_112818_ 5
Trichophyton_rubrum_CBS_118892_ 5
Uncinocarpus_reesii_1704_ 2
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 4
Penicillium_chrysogenum_v1.0 5
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 4
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 5
Aspergillus_sydowii_v1.0 4
Aspergillus_versicolor_v1.0 4
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 5
Neosartorya_fischeri_NRRL_181_ 5
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 5
Aspergillus_oryzae_RIB40_ 5
Aspergillus_niger_22 3
Aspergillus_niger_ATCC_1015_ 4
Aspergillus_flavus_NRRL3357_ 5
Aspergillus_clavatus_NRRL_1_ 5
Penicillium_marneffei_ATCC_18224_ 5
Tuber_melanosporum_Mel28_22 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4
Hansenula_polymorpha_v2.0 3
Dekkera_bruxellensis_CBS_2499_v2.0 4
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 4
Candida_tropicalis_MYA-3404_ 3
Candida_parapsilosis_ 3
Candida_albicans_SC5314 5
Lodderomyces_elongisporus_NRRL_YB-4239_ 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 4
Pichia_stipitis_CBS_6054_ 3
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 3
Wickerhamomyces_anomalus 3
Pichia_pastoris_GS115_ 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 4
Candida_lusitaniae_ATCC_42720_ 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 3
Candida_glabrata_CBS138 2
Kluyveromyces_thermotolerans_CBS_6340 4
Lachancea_kluyveri_ 4
Kluyveromyces_waltii 5
Ashbya_gossypii_ATCC_10895_ 2
Zygosaccharomyces_rouxii_ 3
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   3
Saccharomyces_bayanus_MIT 4
Kluyveromyces_lactis 3
Schizosaccharomyces_cryophilus_OY26_22 3
Schizosaccharomyces_octosporus_yFS286_ 3
Schizosaccharomyces_japonicus_yFS275_ 2
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 5
Allomyces_macrogynus_ATCC_38327_ 6
Spizellomyces_punctatus_DAOM_BR117_ 6
Dictyostelium_discoideum 5
Dictyostelium_purpureum_ 4
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 2
Entamoeba_histolytica_1 3
Selaginella_moellendorffii_ 8
Pinus_taeda   (Loblolly pine)   4
Picea_abies   (Norway spruce)   2
Eucalyptus_grandis_v201   (Rose gum)   41
Theobroma_cacao_B97-61/B2_v1   (Cacao)   17
Gossypium_raimondii_v221 44
Citrus_clementina_v165 21
Citrus_sinensis_v154   (Sweet orange)   37
Thellungiella_halophila_v173 16
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   20
Capsella_rubella_v183 24
Arabidopsis_lyrata_   (Lyrate rockcress)   18
Arabidopsis_thaliana_10   (Thale cress)   26
Carica_papaya_   (Papaya)   12
Medicago_truncatula_   (Barrel medic)   28
Phaseolus_vulgaris_v186   (French bean)   18
Glycine_max_v109   (Soybean)   30
Cucumis_sativus_v122   (Cucumber)   19
Fragaria_vesca_   (Wild strawberry)   9
Malus_domestica_v196   (Apple)   11
Prunus_persica_v139   (Peach)   15
Linum_usitatissimum_v200   (Flax)   26
Manihot_esculenta_v147   (Cassava)   19
Populus_trichocarpa_v156   (Black cottonwood)   35
Vitis_vinifera_   (Wine grape)   12
Mimulus_guttatus_v140   (Spotted monkey flower)   15
Solanum_lycopersicum_v.2.3   (Tomato)   14
Solanum_tuberosum_   (Potato)   18
Actinidia_chinensis_Hongyang_ 13
Aquilegia_coerulea_v195 29
Triticum_urartu_22 7
Triticum_aestivum_22   (Bread wheat)   14
Aegilops_tauschii_22 5
Brachypodium_distachyon_   (Stiff brome)   12
Oryza_barthii_22   (African wild rice)   13
Oryza_meridionalis_22 12
Oryza_glumaepatula_22 11
Oryza_glaberrima   (African rice)   11
Oryza_punctata_22 14
Oryza_nivara_22 12
Oryza_brachyantha_22   (Malo sina)   8
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   14
Oryza_sativa_v193   (Rice)   14
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9
Panicum_virgatum_v202   (Switchgrass)   17
Setaria_italica_v164   (Foxtail millet)   10
Zea_mays_subsp._mays_   (Maize)   26
Zea_mays_v181   (Maize)   31
Sorghum_bicolor_   (Sorghum)   10
Musa_balbisiana   (Balbis banana)   15
Musa_acuminata_22   (Wild Malaysian banana)   10
Amborella_trichopoda_22 9
Physcomitrella_patens 9
Coccomyxa_subellipsoidea_sp._C-169_v2 3
Asterochloris_sp._Cgr/DA1pho_v1.0 2
Chlorella_variabilis_sp._NC64A_ 5
Chlorella_vulgaris_ 4
Volvox_carteri_f._nagariensis_ 4
Volvox_carteri_v199 8
Chlamydomonas_reinhardtii_4.0 9
Ostreococcus_sp._RCC809_ 5
Ostreococcus_lucimarinus_CCE9901_ 7
Ostreococcus_tauri_ 4
Bathycoccus_prasinos_ 6
Micromonas_sp._RCC299_ 5
Micromonas_pusilla_CCMP1545_v3.0 2
Cyanidioschyzon_merolae_strain_10D_22 7
Cyanidioschyzon_merolae 7
Porphyridium_purpureum_02_2012 11
Thecamonas_trahens_ATCC_50062_ 6
Bigelowiella_natans_CCMP2755_22 7
Giardia_lamblia_2.3 3
Cyanophora_paradoxa_ 3
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 3
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 6
Aureococcus_anophagefferens_ 2
Albugo_laibachii_22 6
Pythium_iwayamai_DAOM_BR242034_22 7
Pythium_arrhenomanes_ATCC_12531_22 7
Pythium_ultimum_v1.7-2 8
Pythium_aphanidermatum_DAOM_BR444_22 8
Pythium_irregulare_DAOM_BR486_22 9
Pythium_vexans_DAOM_BR484_22 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   11
Phytophthora_sojae_1.1 6
Phytophthora_infestans_T30-4_ 12
Phytophthora_capsici_ 9
Hyaloperonospora_arabidopsidis_22 6
Phaeodactylum_tricornutumCCAP_1055/1 11
Fragilariopsis_cylindrus 18
Thalassiosira_pseudonana_CCMP1335 10
Perkinsus_marinus_ATCC_50983_ 3
Paramecium_tetraurelia_ 6
Tetrahymena_thermophila_SB210_1_ 3
Neospora_caninum 2
Toxoplasma_gondii_VEG 2
Toxoplasma_gondii_ME49 4
Toxoplasma_gondii_GT1 3
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Symbiodinium_minutum_clade_B1_v1.2 10
Naegleria_gruberi_ 5
Trichomonas_vaginalis_ 2
Guillardia_theta_CCMP2712_v1.0_ 11
Emiliania_huxleyi_CCMP1516_ 15
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Conexibacter_woesei_DSM_14684 2
Cryptobacterium_curtum_DSM_15641 1
Eggerthella_sp._YY7918 1
Eggerthella_lenta_DSM_2243 1
Slackia_heliotrinireducens_DSM_20476 2
Olsenella_uli_DSM_7084 2
Atopobium_parvulum_DSM_20469 1
Coriobacterium_glomerans_PW2 2
Rubrobacter_xylanophilus_DSM_9941 1
Ilumatobacter_coccineus 3
Acidimicrobium_ferrooxidans_DSM_10331 2
Thermobispora_bispora_DSM_43833 1
Nakamurella_multipartita_DSM_44233 4
Modestobacter_marinus 2
Blastococcus_saxobsidens_DD2 3
Geodermatophilus_obscurus_DSM_43160 2
Kineococcus_radiotolerans_SRS30216 3
Catenulispora_acidiphila_DSM_44928 5
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 3
Frankia_sp._EAN1pec 2
Frankia_alni_ACN14a 2
Thermobifida_fusca_YX 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3
Thermomonospora_curvata_DSM_43183 4
Streptosporangium_roseum_DSM_43021 4
Kitasatospora_setae_KM-6054 5
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 3
Streptomyces_flavogriseus_ATCC_33331 3
Streptomyces_sp._SirexAA-E 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 3
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 2
Streptomyces_avermitilis_MA-4680 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 3
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2
Actinosynnema_mirum_DSM_43827 5
Saccharomonospora_viridis_DSM_43017 2
Pseudonocardia_dioxanivorans_CB1190 2
Saccharopolyspora_erythraea_NRRL_2338 3
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 2
Nocardioides_sp._JS614 3
Propionibacterium_propionicum_F0230a 2
Propionibacterium_acnes_SK137 2
Microlunatus_phosphovorus_NM-1 2
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 2
Salinispora_arenicola_CNS-205 3
Salinispora_tropica_CNB-440 4
Verrucosispora_maris_AB-18-032 2
Micromonospora_sp._L5 3
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 2
Segniliparus_rotundus_DSM_44985 1
Tsukamurella_paurometabola_DSM_20162 3
Gordonia_sp._KTR9 3
Gordonia_polyisoprenivorans_VH2 2
Gordonia_bronchialis_DSM_43247 3
Rhodococcus_jostii_RHA1 3
Rhodococcus_equi_103S 2
Rhodococcus_opacus_B4 2
Rhodococcus_erythropolis_PR4 3
Nocardia_cyriacigeorgica_GUH-2 3
Nocardia_farcinica_IFM_10152 3
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_massiliense_str._GO_06 2
Mycobacterium_abscessus_ATCC_19977 4
Mycobacterium_sp._JLS 5
Mycobacterium_intracellulare_ATCC_13950 4
Mycobacterium_avium_104 4
Mycobacterium_vanbaalenii_PYR-1 4
Mycobacterium_canettii_CIPT_140010059 4
Mycobacterium_africanum_GM041182 4
Mycobacterium_tuberculosis_KZN_1435 4
Mycobacterium_tuberculosis 4
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 4
Mycobacterium_rhodesiae_NBB3 5
Mycobacterium_ulcerans_Agy99 3
Mycobacterium_gilvum_PYR-GCK 4
Mycobacterium_chubuense_NBB4 4
Mycobacterium_marinum_M 4
Mycobacterium_smegmatis_str._MC2_155 7
Mycobacterium_leprae_Br4923 3
Corynebacterium_resistens_DSM_45100 2
Corynebacterium_aurimucosum_ATCC_700975 1
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_efficiens_YS-314 4
Corynebacterium_ulcerans_0102 4
Corynebacterium_urealyticum_DSM_7109 2
Corynebacterium_jeikeium_K411 1
Corynebacterium_variabile_DSM_44702 1
Corynebacterium_pseudotuberculosis_316 3
Corynebacterium_glutamicum_R 3
Corynebacterium_diphtheriae_NCTC_13129 3
Sanguibacter_keddieii_DSM_10542 2
Kytococcus_sedentarius_DSM_20547 5
Beutenbergia_cavernae_DSM_12333 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Microbacterium_testaceum_StLB037 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Intrasporangium_calvum_DSM_43043 5
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 2
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 1
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 2
Arthrobacter_arilaitensis_Re117 1
Kocuria_rhizophila_DC2201 2
Rothia_mucilaginosa_DY-18 2
Rothia_dentocariosa_ATCC_17931 2
Arthrobacter_sp._Rue61a 2
Arthrobacter_sp._FB24 1
Renibacterium_salmoninarum_ATCC_33209 1
Micrococcus_luteus_NCTC_2665 3
Gardnerella_vaginalis_409-05 1
Bifidobacterium_longum_subsp._longum_JDM301 4
Bifidobacterium_animalis_subsp._lactis_Bl-04 2
Bifidobacterium_dentium_Bd1 2
Bifidobacterium_breve_ACS-071-V-Sch8b 3
Bifidobacterium_bifidum_S17 3
Bifidobacterium_adolescentis_ATCC_15703 2
Arcanobacterium_haemolyticum_DSM_20595 1
Mobiluncus_curtisii_ATCC_43063 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 1
Deinococcus_gobiensis_I-0 2
Deinococcus_proteolyticus_MRP 2
Deinococcus_radiodurans_R1 1
Megasphaera_elsdenii_DSM_20460 1
Acidaminococcus_intestini_RyC-MR95 1
Megamonas_hypermegale 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1
Eubacterium_siraeum 1
Ruminococcus_sp. 1
Ruminococcus_bromii 1
Sulfobacillus_acidophilus_DSM_10332 1
Oscillibacter_valericigenes_Sjm18-20 1
butyrate-producing_bacterium_SS3/4 1
Syntrophobotulus_glycolicus_DSM_8271 1
Eubacterium_eligens_ATCC_27750 2
Eubacterium_limosum_KIST612 2
Clostridium_difficile_630 1
Clostridium_saccharolyticum_WM1 2
Clostridium_phytofermentans_ISDg 1
Clostridium_lentocellum_DSM_5427 1
[Ruminococcus]_obeum 1
[Ruminococcus]_torques 2
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Coprococcus_sp._ART55/1 1
Roseburia_hominis_A2-183 2
Roseburia_intestinalis 1
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 1
Caldicellulosiruptor_hydrothermalis_108 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1
Acetohalobium_arabaticum_DSM_5501 1
Carnobacterium_sp._WN1359 1
Aerococcus_urinae_ACS-120-V-Col10a 1
Tetragenococcus_halophilus_NBRC_12172 1
Enterococcus_hirae_ATCC_9790 1
Enterococcus_faecium_Aus0004 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_rhamnosus_Lc_705 2
Lactobacillus_amylovorus_GRL1118 1
Lactobacillus_plantarum_JDM1 1
Streptococcus_intermedius_JTH08 1
Streptococcus_gallolyticus_UCN34 1
Streptococcus_pasteurianus_ATCC_43144 1
Streptococcus_mutans_NN2025 1
Streptococcus_suis_P1/7 1
Exiguobacterium_sp._AT1b 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_sp._JDR-2 1
Paenibacillus_mucilaginosus_3016 1
Bacillus_sp._JS 2
Bacillus_amyloliquefaciens_FZB42 2
Bacillus_atrophaeus_1942 1
Bacillus_subtilis_subsp._subtilis_str._168 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_halodurans_C-125 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_anthracis_str._A0248 1
Bacillus_clausii_KSM-K16 1
Bacillus_coagulans_2-6 1
Macrococcus_caseolyticus_JCSC5402 2
Staphylococcus_pseudintermedius_HKU10-03 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1
Staphylococcus_lugdunensis_HKU09-01 1
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_epidermidis_RP62A 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1
Staphylococcus_aureus_subsp._aureus_JH1 1
Staphylococcus_aureus 1
Chlorobium_luteolum_DSM_273 1
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 2
Rhodothermus_marinus_DSM_4252 1
Flexibacter_litoralis_DSM_6794 1
Candidatus_Amoebophilus_asiaticus_5a2 1
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 2
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 2
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 1
Tannerella_forsythia_ATCC_43037 1
Paludibacter_propionicigenes_WB4 2
Odoribacter_splanchnicus_DSM_20712 1
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 2
Bacteroides_helcogenes_P_36-108 1
Zobellia_galactanivorans 3
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Parachlamydia_acanthamoebae_UV-7 3
Simkania_negevensis_Z 1
Isosphaera_pallida_ATCC_43644 1
Rhodopirellula_baltica_SH_1 3
Pirellula_staleyi_DSM_6068 1
Akkermansia_muciniphila_ATCC_BAA-835 1
Anaerobaculum_mobile_DSM_13181 1
Brachyspira_murdochii_DSM_12563 0
Brachyspira_intermedia_PWS/A 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_pleomorpha_str._Grapes 1
Sphaerochaeta_globus_str._Buddy 1
Sphaerochaeta_coccoides_DSM_17374 1
Spirochaeta_caldaria_DSM_7334 2
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Treponema_succinifaciens_DSM_2489 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 1
Fervidobacterium_pennivorans_DSM_9078 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_mallensis_MP5ACTX8 1
Terriglobus_saanensis_SP1PR4 1
Terriglobus_roseus_DSM_18391 1
Leptotrichia_buccalis_C-1013-b 1
Ilyobacter_polytropus_DSM_2926 1
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Candidatus_Saccharimonas_aalborgensis 1
Arcobacter_sp._L 1
Arcobacter_nitrofigilis_DSM_7299 1
Arcobacter_butzleri_RM4018 1
Syntrophus_aciditrophicus_SB 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfatibacillum_alkenivorans_AK-01 0
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 1
Pelobacter_propionicus_DSM_2379 0
Pelobacter_carbinolicus_DSM_2380 0
Babela_massiliensis 1
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_fulvus_HW-1 0
Thauera_sp._MZ1T 1
Pseudogulbenkiania_sp._NH8B 1
Laribacter_hongkongensis_HLHK9 1
Chromobacterium_violaceum_ATCC_12472 1
Neisseria_meningitidis_alpha14 1
Neisseria_meningitidis_FAM18 1
Neisseria_lactamica_020-06 1
Neisseria_gonorrhoeae_NCCP11945 1
beta_proteobacterium_CB 2
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 1
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 2
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 2
Burkholderia_phytofirmans_PsJN 2
Burkholderia_phymatum_STM815 3
Burkholderia_xenovorans_LB400 3
Ralstonia_eutropha_JMP134 2
Cupriavidus_taiwanensis_LMG_19424 2
Cupriavidus_metallidurans_CH34 2
Cupriavidus_necator_N-1 3
Ralstonia_eutropha_H16 2
Ralstonia_pickettii_12D 2
Ralstonia_solanacearum_CFBP2957 2
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2
Burkholderia_sp._RPE64 3
Burkholderia_sp._CCGE1002 3
Burkholderia_thailandensis_E264 2
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 3
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 2
Burkholderia_glumae_BGR1 2
Verminephrobacter_eiseniae_EF01-2 2
Alicycliphilus_denitrificans_K601 2
Ramlibacter_tataouinensis_TTB310 2
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 2
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 2
Acidovorax_sp._KKS102 2
Acidovorax_sp._JS42 2
Acidovorax_citrulli_AAC00-1 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 2
Comamonas_testosteroni_CNB-2 2
Herminiimonas_arsenicoxydans 1
Collimonas_fungivorans_Ter331 2
Janthinobacterium_sp._Marseille 2
Pusillimonas_sp._T7-7 3
Advenella_kashmirensis_WT001 2
Taylorella_asinigenitalis_MCE3 1
Taylorella_equigenitalis_MCE9 1
Bordetella_petrii_DSM_12804 2
Bordetella_avium_197N 2
Bordetella_pertussis_Tohama_I 2
Bordetella_parapertussis_12822 2
Bordetella_bronchiseptica_RB50 3
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 3
Thiobacillus_denitrificans_ATCC_25259 1
Magnetococcus_marinus_MC-1 2
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 3
Caulobacter_crescentus_NA1000 4
Caulobacter_segnis_ATCC_21756 3
Phenylobacterium_zucineum_HLK1 3
Erythrobacter_litoralis_HTCC2594 1
Sphingopyxis_alaskensis_RB2256 2
Novosphingobium_sp._PP1Y 2
Novosphingobium_aromaticivorans_DSM_12444 2
Sphingobium_sp._SYK-6 1
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 1
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 2
Hirschia_baltica_ATCC_49814 1
Hyphomonas_neptunium_ATCC_15444 3
Dinoroseobacter_shibae_DFL_12 1
Phaeobacter_gallaeciensis_2.10 2
Pseudovibrio_sp._FO-BEG1 2
Jannaschia_sp._CCS1 1
Ruegeria_sp._TM1040 1
Ruegeria_pomeroyi_DSS-3 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 2
Rhodobacter_sphaeroides_ATCC_17029 2
Rhodobacter_capsulatus_SB_1003 2
Paracoccus_denitrificans_PD1222 2
Rhodospirillum_photometricum_DSM_122 3
Tistrella_mobilis_KA081020-065 1
Magnetospirillum_magneticum_AMB-1 3
Rhodospirillum_centenum_SW 3
Rhodospirillum_rubrum_F11 3
Azospirillum_lipoferum_4B 2
Azospirillum_sp._B510 2
Azospirillum_brasilense_Sp245 3
Gluconacetobacter_xylinus_NBRC_3288 2
Granulibacter_bethesdensis_CGDNIH1 2
Gluconacetobacter_diazotrophicus_PAl_5 5
Acidiphilium_multivorum_AIU301 2
Acidiphilium_cryptum_JF-5 3
Gluconobacter_oxydans_621H 1
Acetobacter_pasteurianus_IFO_3283-01 2
Polymorphum_gilvum_SL003B-26A1 2
Starkeya_novella_DSM_506 4
Xanthobacter_autotrophicus_Py2 4
Azorhizobium_caulinodans_ORS_571 3
Methylobacterium_chloromethanicum_CM4 3
Methylobacterium_extorquens_AM1 3
Methylobacterium_sp._4-46 4
Methylobacterium_populi_BJ001 4
Methylobacterium_nodulans_ORS_2060 3
Methylobacterium_radiotolerans_JCM_2831 4
Parvibaculum_lavamentivorans_DS-1 3
Ochrobactrum_anthropi_ATCC_49188 3
Brucella_microti_CCM_4915 3
Brucella_pinnipedialis_B2/94 3
Brucella_canis_ATCC_23365 3
Brucella_suis_ATCC_23445 3
Brucella_melitensis_ATCC_23457 3
Brucella_ovis_ATCC_25840 3
Brucella_abortus_S19 3
Sinorhizobium_fredii_NGR234 2
Sinorhizobium_medicae_WSM419 3
Sinorhizobium_meliloti_AK83 3
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 2
Rhizobium_leguminosarum_bv._viciae_3841 2
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 3
Mesorhizobium_sp._BNC1 2
Mesorhizobium_opportunistum_WSM2075 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 3
Mesorhizobium_loti_MAFF303099 3
Methylocella_silvestris_BL2 3
Beijerinckia_indica_subsp._indica_ATCC_9039 2
Rhodomicrobium_vannielii_ATCC_17100 2
Hyphomicrobium_sp._MC1 3
Hyphomicrobium_denitrificans_ATCC_51888 2
Oligotropha_carboxidovorans_OM4 2
Rhodopseudomonas_palustris_BisA53 5
Nitrobacter_winogradskyi_Nb-255 2
Nitrobacter_hamburgensis_X14 4
Bradyrhizobium_japonicum_USDA_110 5
Bradyrhizobium_sp._ORS_278 4
Methylocystis_sp._SC2 2
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2
Vibrio_fischeri_MJ11 1
Vibrio_sp._Ex25 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 1
Vibrio_furnissii_NCTC_11218 1
Vibrio_vulnificus_MO6-24/O 1
Vibrio_cholerae_O395 1
Psychromonas_ingrahamii_37 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 1
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_nitratireducens_FR1064 1
Marinobacter_adhaerens_HP15 0
Marinobacter_sp._BSs20148 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 0
Marinomonas_mediterranea_MMB-1 1
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Dichelobacter_nodosus_VCS1703A 1
Rhodanobacter_denitrificans 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 2
Pseudoxanthomonas_suwonensis_11-1 2
Stenotrophomonas_maltophilia_K279a 2
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 2
Xanthomonas_campestris_pv._campestris_str._B100 3
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Coxiella_burnetii_Dugway_5J108-111 1
Legionella_longbeachae_NSW150 0
gamma_proteobacterium_HdN1 1
Sodalis_glossinidius_str._'morsitans' 1
Cronobacter_turicensis_z3032 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Pseudomonas_sp._TKP 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 2
Psychrobacter_sp._G 2
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 2
Psychrobacter_cryohalolentis_K5 2
Moraxella_catarrhalis_RH4 2
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_sp._ADP1 1
Francisella_novicida_U112 1
Methanoregula_boonei_6A8 1
Methanospirillum_hungatei_JF-1 1
Halorubrum_lacusprofundi_ATCC_49239 0
Haloarcula_hispanica_ATCC_33960 1
Haloarcula_marismortui_ATCC_43049 2

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   6
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   6
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4
Cryptococcus_neoformans_var._grubii_H99_ 2
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 4
Paracoccidioides_brasiliensis_Pb03_ 4
Coccidioides_posadasii_str._Silveira_ 5
Coccidioides_immitis_RMSCC_3703_ 6
Coccidioides_immitis_RMSCC_2394_ 6
Coccidioides_immitis_H538.4_ 6
Ajellomyces_dermatitidis_ER-3_ 4
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 4
Histoplasma_capsulatum_G186AR 3
Aspergillus_fumigatus_A1163_ 5
Candida_albicans_WO-1_ 4
Saccharomyces_cerevisiae_UC5 2
Saccharomyces_cerevisiae_PW5 2
Saccharomyces_cerevisiae_FL100 3
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 3
Saccharomyces_cerevisiae_T7 3
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 3
Saccharomyces_cerevisiae_VL3 2
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 3
Saccharomyces_cerevisiae_AWRI796 2
Saccharomyces_cerevisiae_Sigma1278b 3
Saccharomyces_cerevisiae_W303 3
Saccharomyces_cerevisiae_JAY291 2
Saccharomyces_cerevisiae_AWRI1631 2
Saccharomyces_cerevisiae_YPS163 2
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 2
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 3
Saccharomyces_cerevisiae_YJM789 3
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JEL423_ 2
Batrachochytrium_dendrobatidis_JAM81_ 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   14
Hordeum_vulgare_22   (Domesticated barley)   11
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   10
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 2
Chroococcidiopsis_thermalis_PCC_7203 1
Anabaena_cylindrica_PCC_7122 1
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._EuI1c 2
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 3
Streptomyces_albus_J1074 2
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 2
Streptomyces_fulvissimus_DSM_40593 4
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 4
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 2
Propionibacterium_avidum_44067 2
Propionibacterium_acnes_ATCC_11828 2
Propionibacterium_acnes_TypeIA2_P.acn31 2
Propionibacterium_acnes_TypeIA2_P.acn17 2
Propionibacterium_acnes_TypeIA2_P.acn33 2
Propionibacterium_acnes_C1 2
Propionibacterium_acnes_HL096PA1 2
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 2
Propionibacterium_acidipropionici_ATCC_4875 3
Actinoplanes_friuliensis_DSM_7358 2
Rhodococcus_pyridinivorans_SB3094 3
Rhodococcus_erythropolis_CCM2595 3
Nocardia_brasiliensis_ATCC_700358 2
Mycobacterium_sp._MOTT36Y 4
Mycobacterium_sp._JDM601 4
Mycobacterium_abscessus_subsp._bolletii_50594 3
Mycobacterium_liflandii_128FXT 5
Mycobacterium_sp._KMS 5
Mycobacterium_sp._MCS 5
Mycobacterium_yongonense_05-1390 4
Mycobacterium_intracellulare_MOTT-64 4
Mycobacterium_indicus_pranii_MTCC_9506 4
Mycobacterium_intracellulare_MOTT-02 4
Mycobacterium_avium_subsp._paratuberculosis_MAP4 3
Mycobacterium_avium_subsp._paratuberculosis_K-10 3
Mycobacterium_canettii_CIPT_140070017 4
Mycobacterium_canettii_CIPT_140060008 4
Mycobacterium_canettii_CIPT_140070008 4
Mycobacterium_canettii_CIPT_140070010 4
Mycobacterium_tuberculosis_EAI5/NITR206 4
Mycobacterium_tuberculosis_EAI5 4
Mycobacterium_tuberculosis_CAS/NITR204 3
Mycobacterium_tuberculosis_str._Beijing/NITR203 4
Mycobacterium_tuberculosis_UT205 4
Mycobacterium_tuberculosis_RGTB423 3
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 4
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 4
Mycobacterium_tuberculosis_KZN_605 4
Mycobacterium_tuberculosis_KZN_4207 4
Mycobacterium_tuberculosis_CCDC5180 4
Mycobacterium_tuberculosis_CCDC5079 4
Mycobacterium_tuberculosis_CCDC5079 4
Mycobacterium_tuberculosis_H37Ra 4
Mycobacterium_tuberculosis_str._Haarlem/NITR202 2
Mycobacterium_tuberculosis_str._Haarlem 4
Mycobacterium_tuberculosis_F11 4
Mycobacterium_tuberculosis_H37Rv 4
Mycobacterium_tuberculosis_CDC1551 4
Mycobacterium_bovis_AF2122/97 4
Mycobacterium_bovis_BCG_str._Korea_1168P 5
Mycobacterium_bovis_BCG_str._Mexico 4
Mycobacterium_bovis_BCG_str._Tokyo_172 4
Mycobacterium_gilvum_Spyr1 4
Mycobacterium_smegmatis_str._MC2_155 7
Mycobacterium_leprae_TN 3
Mycobacterium_kansasii_ATCC_12478 4
Corynebacterium_maris_DSM_45190 3
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 3
Corynebacterium_terpenotabidum_Y-11 0
Corynebacterium_ulcerans_BR-AD22 4
Corynebacterium_ulcerans_809 4
Corynebacterium_urealyticum_DSM_7111 2
Corynebacterium_argentoratense_DSM_44202 1
Corynebacterium_callunae_DSM_20147 3
Corynebacterium_pseudotuberculosis_258 3
Corynebacterium_pseudotuberculosis_Cp162 4
Corynebacterium_pseudotuberculosis_P54B96 3
Corynebacterium_pseudotuberculosis_267 3
Corynebacterium_pseudotuberculosis_1/06-A 3
Corynebacterium_pseudotuberculosis_42/02-A 3
Corynebacterium_pseudotuberculosis_3/99-5 3
Corynebacterium_pseudotuberculosis_31 3
Corynebacterium_pseudotuberculosis_CIP_52.97 3
Corynebacterium_pseudotuberculosis_PAT10 3
Corynebacterium_pseudotuberculosis_I19 3
Corynebacterium_pseudotuberculosis_FRC41 4
Corynebacterium_pseudotuberculosis_C231 3
Corynebacterium_pseudotuberculosis_1002 3
Corynebacterium_glutamicum_MB001 3
Corynebacterium_glutamicum_SCgG2 2
Corynebacterium_glutamicum_SCgG1 2
Corynebacterium_glutamicum_ATCC_13032 3
Corynebacterium_glutamicum_ATCC_13032 3
Corynebacterium_glutamicum_ATCC_13032 3
Corynebacterium_diphtheriae_BH8 3
Corynebacterium_diphtheriae_INCA_402 3
Corynebacterium_diphtheriae_VA01 3
Corynebacterium_diphtheriae_HC04 3
Corynebacterium_diphtheriae_HC03 3
Corynebacterium_diphtheriae_HC02 3
Corynebacterium_diphtheriae_HC01 3
Corynebacterium_diphtheriae_241 3
Corynebacterium_diphtheriae_CDCE_8392 3
Corynebacterium_diphtheriae_PW8 3
Corynebacterium_diphtheriae_C7_(beta) 3
Corynebacterium_diphtheriae_31A 3
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1
Clavibacter_michiganensis_subsp._sepedonicus 2
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Gardnerella_vaginalis_HMP9231 1
Gardnerella_vaginalis_ATCC_14019 1
Bifidobacterium_longum_NCC2705 3
Bifidobacterium_longum_DJO10A 3
Bifidobacterium_longum_subsp._infantis_157F 4
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 3
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 3
Bifidobacterium_longum_subsp._longum_KACC_91563 5
Bifidobacterium_longum_subsp._longum_BBMN68 3
Bifidobacterium_longum_subsp._longum_F8 4
Bifidobacterium_longum_subsp._longum_JCM_1217 3
Bifidobacterium_thermophilum_RBL67 3
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 2
Bifidobacterium_animalis_subsp._lactis_Bl12 2
Bifidobacterium_animalis_subsp._lactis_B420 2
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 2
Bifidobacterium_animalis_subsp._lactis_BLC1 2
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 4
Bifidobacterium_animalis_subsp._lactis_Bi-07 2
Bifidobacterium_animalis_subsp._lactis_V9 2
Bifidobacterium_animalis_subsp._lactis_DSM_10140 2
Bifidobacterium_animalis_subsp._lactis_BB-12 4
Bifidobacterium_animalis_subsp._lactis_AD011 2
Bifidobacterium_breve_UCC2003 3
Bifidobacterium_asteroides_PRL2011 3
Bifidobacterium_bifidum_PRL2010 2
Bifidobacterium_bifidum_BGN4 3
Actinomyces_graevenitzii_C83_ 1
Actinomyces_odontolyticus_ATCC_17982 1
Actinomyces_viscosus_C505 1
Erysipelothrix_rhusiopathiae_SY1027 1
Eubacterium_siraeum_V10Sc8a 1
Ruminococcus_champanellensis_18P13 1
Sulfobacillus_acidophilus_TPY 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 1
Roseburia_intestinalis_XB6B4 1
Clostridium_sp._SY8519 3
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_perfringens_str._13 1
Enterococcus_mundtii_QU_25 1
Enterococcus_faecium_Aus0085 1
Enterococcus_faecium_NRRL_B-2354 1
Enterococcus_faecium_DO 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 2
Lactobacillus_rhamnosus_LOCK900 2
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_johnsonii_N6.2 0
Lactobacillus_johnsonii_NCC_533 0
Lactobacillus_salivarius_UCC118 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 2
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_intermedius_C270 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_mutans_GS-5 1
Streptococcus_mutans_LJ23 1
Streptococcus_mutans_UA159 1
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 1
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_D12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_suis_05ZYH33 1
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Paenibacillus_polymyxa_SC2 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_CC178 2
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_IT-45 2
Bacillus_amyloliquefaciens_XH7 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_amyloliquefaciens_TA208 1
Bacillus_amyloliquefaciens_DSM_7 1
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 2
Bacillus_subtilis_XF-1 2
Bacillus_subtilis_QB928 2
Bacillus_subtilis_BSn5 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2
Bacillus_subtilis_subsp._spizizenii_str._W23 2
Bacillus_subtilis_subsp._natto_BEST195 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_AH820 1
Bacillus_cereus_ATCC_10987 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_pseudintermedius_ED99 1
Staphylococcus_pasteuri_SP1 1
Staphylococcus_lugdunensis_N920143 1
Staphylococcus_warneri_SG1 1
Staphylococcus_epidermidis_ATCC_12228 1
Staphylococcus_aureus_CA-347 1
Staphylococcus_aureus_Bmb9393 1
Staphylococcus_aureus_M1 1
Staphylococcus_aureus_08BA02176 1
Staphylococcus_aureus_ST228/18412 1
Staphylococcus_aureus_ST228/18341 1
Staphylococcus_aureus_ST228/16125 1
Staphylococcus_aureus_ST228/16035 1
Staphylococcus_aureus_ST228/15532 1
Staphylococcus_aureus_ST228/10497 1
Staphylococcus_aureus_ST228/10388 1
Staphylococcus_aureus_04-02981 1
Staphylococcus_aureus_RF122 1
Staphylococcus_aureus_subsp._aureus_Z172 1
Staphylococcus_aureus_subsp._aureus_6850 1
Staphylococcus_aureus_subsp._aureus_SA957 1
Staphylococcus_aureus_subsp._aureus_CN1 1
Staphylococcus_aureus_subsp._aureus_SA40 1
Staphylococcus_aureus_subsp._aureus_11819-97 1
Staphylococcus_aureus_subsp._aureus_M013 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1
Staphylococcus_aureus_subsp._aureus_VC40 1
Staphylococcus_aureus_subsp._aureus_T0131 1
Staphylococcus_aureus_subsp._aureus_LGA251 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1
Staphylococcus_aureus_subsp._aureus_ED133 1
Staphylococcus_aureus_subsp._aureus_ED98 1
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_55/2053 1
Staphylococcus_aureus_subsp._aureus_TCH60 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1
Staphylococcus_aureus_subsp._aureus_71193 1
Staphylococcus_aureus_subsp._aureus_S0385 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1
Staphylococcus_aureus_subsp._aureus_Mu3 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1
Staphylococcus_aureus_subsp._aureus_JH9 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1
Staphylococcus_aureus_subsp._aureus_MW2 1
Staphylococcus_aureus_subsp._aureus_N315 1
Staphylococcus_aureus_subsp._aureus_Mu50 1
Staphylococcus_aureus_subsp._aureus_COL 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1
Salinibacter_ruber_DSM_13855 2
Rhodothermus_marinus_SG0.5JP17-172 1
Echinicola_vietnamensis_DSM_17526 2
Emticicia_oligotrophica_DSM_17448 1
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 1
Nonlabens_dokdonensis_DSW-6 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Spirochaeta_thermophila_DSM_6578 1
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Desulfobacula_toluolica_Tol2 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 1
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Neisseria_meningitidis_WUE_2594 1
Neisseria_meningitidis_G2136 1
Neisseria_meningitidis_M04-240196 1
Neisseria_meningitidis_M01-240149 1
Neisseria_meningitidis_NZ-05/33 1
Neisseria_meningitidis_M01-240355 1
Neisseria_meningitidis_8013 1
Neisseria_meningitidis_053442 1
Neisseria_meningitidis_Z2491 1
Neisseria_meningitidis_H44/76 1
Neisseria_meningitidis_alpha710 1
Neisseria_meningitidis_MC58 1
Neisseria_gonorrhoeae_TCDC-NG08107 1
Neisseria_gonorrhoeae_FA_1090 1
Candidatus_Kinetoplastibacterium_galatii_TCC219 1
Candidatus_Kinetoplastibacterium_desouzaii_TCC079E 1
Kinetoplastibacterium_blastocrithidii_Candidatus__(ex_Strigomonas_culicis) 1
Kinetoplastibacterium_blastocrithidii_Candidatus__TCC012E 1
Candidatus_Kinetoplastibacterium_crithidii_TCC036E 1
Burkholderia_phenoliruptrix_BR3459a 2
Pandoraea_pnomenusa_3kgm 2
Ralstonia_pickettii_12J 2
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_PSI07 2
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 1
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1
Burkholderia_sp._YI23 5
Burkholderia_sp._CCGE1003 2
Burkholderia_sp._CCGE1001 2
Burkholderia_sp._KJ006 2
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 2
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 4
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 2
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 3
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 2
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Alicycliphilus_denitrificans_BC 2
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Taylorella_asinigenitalis_14/45 1
Taylorella_equigenitalis_14/56 1
Taylorella_equigenitalis_ATCC_35865 1
Bordetella_pertussis_CS 2
Bordetella_parapertussis_18323 2
Bordetella_parapertussis_Bpp5 3
Bordetella_bronchiseptica_MO149 3
Bordetella_bronchiseptica_253 3
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 3
Caulobacter_crescentus_CB15 4
Phaeobacter_gallaeciensis_DSM_17395 2
Phaeobacter_gallaeciensis_DSM_26640 2
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 2
Rhodobacter_sphaeroides_KD131 2
Rhodobacter_sphaeroides_ATCC_17025 2
Rhodobacter_sphaeroides_2.4.1 2
Paracoccus_aminophilus_JCM_7686 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 2
Rhodospirillum_rubrum_ATCC_11170 3
Gluconacetobacter_diazotrophicus_PAl_5 5
Gluconobacter_oxydans_H24 2
Acetobacter_pasteurianus_386B 2
Acetobacter_pasteurianus_IFO_3283-12 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2
Acetobacter_pasteurianus_IFO_3283-32 2
Acetobacter_pasteurianus_IFO_3283-26 2
Acetobacter_pasteurianus_IFO_3283-22 2
Acetobacter_pasteurianus_IFO_3283-07 2
Acetobacter_pasteurianus_IFO_3283-03 2
Methylobacterium_extorquens_DM4 3
Methylobacterium_extorquens_PA1 4
Brucella_ceti_TE10759-12 2
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 3
Brucella_suis_VBI22 3
Brucella_suis_1330 2
Brucella_suis_1330 2
Brucella_melitensis_NI 3
Brucella_melitensis_M5-90 3
Brucella_melitensis_M28 3
Brucella_melitensis_bv._1_str._16M 3
Brucella_abortus_A13334 3
Brucella_melitensis_biovar_Abortus_2308 3
Brucella_abortus_bv._1_str._9-941 3
Sinorhizobium_fredii_USDA_257 5
Sinorhizobium_fredii_HH103 3
Sinorhizobium_meliloti_2011 3
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 3
Sinorhizobium_meliloti_SM11 3
Sinorhizobium_meliloti_BL225C 4
Sinorhizobium_meliloti_1021 3
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 2
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2
Mesorhizobium_australicum_WSM2073 3
Hyphomicrobium_nitrativorans_NL23 2
Hyphomicrobium_denitrificans_1NES1 3
Oligotropha_carboxidovorans_OM5 2
Oligotropha_carboxidovorans_OM5 2
Rhodopseudomonas_palustris_DX-1 5
Rhodopseudomonas_palustris_TIE-1 5
Rhodopseudomonas_palustris_HaA2 5
Rhodopseudomonas_palustris_BisB5 4
Rhodopseudomonas_palustris_BisB18 4
Rhodopseudomonas_palustris_CGA009 6
Bradyrhizobium_sp._S23321 4
Bradyrhizobium_sp._BTAi1 4
Bradyrhizobium_oligotrophicum_S58 5
Bradyrhizobium_japonicum_USDA_6 5
Simiduia_agarivorans_SA1_=_DSM_21679 1
Mannheimia_succiniciproducens_MBEL55E 2
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_nigripulchritudo_VibrioScope 1
Vibrio_vulnificus_CMCP6 1
Vibrio_vulnificus_YJ016 1
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Glaciecola_psychrophila_170 3
Stenotrophomonas_maltophilia_D457 2
Stenotrophomonas_maltophilia_JV3 2
Stenotrophomonas_maltophilia_R551-3 3
Xanthomonas_citri_subsp._citri_Aw12879 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2
Xanthomonas_axonopodis_Xac29-1 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 2
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 2
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2
Xanthomonas_campestris_pv._raphani_756C 2
Xanthomonas_campestris_pv._campestris_str._8004 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2
Thioflavicoccus_mobilis_8321 1
Coxiella_burnetii_CbuK_Q154 1
Coxiella_burnetii_CbuG_Q212 1
Coxiella_burnetii_RSA_493 1
Legionella_pneumophila_str._Paris 0
Dickeya_dadantii_3937 1
Escherichia_coli_ED1a 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 2
Acinetobacter_johnsonii__SH046 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1
Francisella_tularensis_subsp._holarctica_F92 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1
Francisella_tularensis_subsp._holarctica_OSU18 1
Francisella_tularensis_subsp._holarctica_LVS 1
Francisella_tularensis_subsp._holarctica_FSC200 1
Francisella_tularensis_subsp._tularensis_NE061598 1
Francisella_tularensis_subsp._tularensis_FSC198 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 1
Methanomethylovorans_hollandica_DSM_15978 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Haloarcula_hispanica_N601 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   5
Pan_troglodytes_69_2.1.4   (Chimpanzee)   5
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   5
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   5
Macaca_mulatta_69_1   (Rhesus monkey)   5
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   5
Otolemur_garnettii_69_3   (Small-eared galago)   4
Microcebus_murinus_69_1   (Gray mouse lemur)   3
Rattus_norvegicus_69_3.4   (Norway rat)   4
Mus_musculus_69_38   (House mouse)   4
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4
Cavia_porcellus_69_3   (Domestic guinea pig)   4
Oryctolagus_cuniculus_69_2   (Rabbit)   4
Ochotona_princeps_69   (American pika)   3
Tupaia_belangeri_69   (Northern tree shrew)   3
Sus_scrofa_69_10.2   (Pig)   4
Bos_taurus_69_3.1   (Cattle)   5
Vicugna_pacos_69_1   (Alpaca)   3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_69_1   (Giant panda)   5
Canis_familiaris_69_3.1   (Dog)   5
Felis_catus_69   (Domestic cat)   3
Equus_caballus_69_2   (Horse)   5
Myotis_lucifugus_69_2.0   (Little brown bat)   5
Pteropus_vampyrus_69_1   (Large flying fox)   3
Sorex_araneus_69_1   (European shrew)   3
Erinaceus_europaeus_69   (Western European hedgehog)   4
Procavia_capensis_69_1   (Cape rock hyrax)   5
Loxodonta_africana_69_3   (African savanna elephant)   3
Echinops_telfairi_69   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   5
Ornithorhynchus_anatinus_69_5   (Platypus)   3
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_69_2.0   (Green anole)   5
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6
Latimeria_chalumnae_69_1   (Coelacanth)   6
Gadus_morhua_69_1   (Atlantic cod)   6
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   4
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8
Oryzias_latipes_69_1   (Japanese medaka)   7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   7
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7
Danio_rerio_69_9   (Zebrafish)   10
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   5
Caenorhabditis_elegans_69_215   (Roundworm)   4
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3
Arabidopsis_thaliana_10   (Thale cress)   17

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   11
Homo_sapiens__(NCBI_version)   (Human)   6
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   4
Heliconius_numata__(Incomplete) 3
Loa_loa_v3.3_(Request)   (Eye worm)   2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   3
Lotus_japonicus__(Early_assembly) 7
Malus_x_domestica_(Duplicate)   (Apple)   11
Ricinus_communis__(Early_assembly)   (Castor bean)   14
Nicotiana_benthamiana_0.4.4_(Early_draft) 18
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   14
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   14
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 4
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 19
Protein_Data_Bank_(all_PDB_sequenc) 22
TargetDB__(Targets) 54
Protozoadb_2010_08_(Protozoadb) 38
NCBI_viral_sequences_(Viral) 91
UniProt__viral_sequences_(Viral) 103
PDB_chains_(SCOP_1.75)_(PDB) 0
Core_Eukaryotic_Genes_458_(CEGMA) 4
STRING_v9.0.5_(STRING) 1310
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 11
Uniprot_2018_03_genome 78843
NCBI_2017_08_genome 86612

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.