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Domain combinations for _gap_,55961,57903,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55961 - Bet v1-like
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Albugo_laibachii_22 15
Pythium_iwayamai_DAOM_BR242034_22 5
Pythium_arrhenomanes_ATCC_12531_22 9
Pythium_ultimum_v1.7-2 11
Pythium_aphanidermatum_DAOM_BR444_22 14
Pythium_irregulare_DAOM_BR486_22 9
Pythium_vexans_DAOM_BR484_22 8
Phytophthora_ramorum_1.1   (Sudden oak death agent)   16
Phytophthora_sojae_1.1 16
Phytophthora_infestans_T30-4_ 18
Phytophthora_capsici_ 12
Hyaloperonospora_arabidopsidis_22 9

Others
Genome     Number
STRING_v9.0.5_(STRING) 32
NCBI_2017_08_genome 166
Uniprot_2018_03_genome 3879

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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