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Domain combinations for _gap_,56104,_gap_,53300,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56104 - SAICAR synthase-like
53300 - vWA-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Equus_caballus_76_2   (Horse)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0

Longest transcript per gene
Genome     Number
Macaca_mulatta_69_1   (Rhesus monkey)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Equus_caballus_69_2   (Horse)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Gallus_gallus_69_2   (Chicken)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   1

Others
Genome     Number
NCBI_2017_08_genome 10
STRING_v9.0.5_(STRING) 9
Uniprot_2018_03_genome 169

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