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Domain combinations for _gap_,56112,50044,_gap_,46934,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
50044 - SH3-domain
46934 - UBA-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mus_musculus_76_38   (House mouse)   2
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Gallus_gallus_76_4   (Chicken)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Lepisosteus_oculatus_76   (Spotted gar)   2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   3
Octopus_bimaculoides_280 1

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2

Longest transcript per gene
Genome     Number
Mus_musculus_69_38   (House mouse)   1
Bos_taurus_69_3.1   (Cattle)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   2

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Uniprot_2018_03_genome 1387
NCBI_2017_08_genome 461
STRING_v9.0.5_(STRING) 8

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