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Domain combinations for _gap_,56112,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   4
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   4
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   5
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   6
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   2
Ochotona_princeps_76   (American pika)   4
Tupaia_belangeri_76   (Northern tree shrew)   5
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3
Canis_familiaris_76_3.1   (Dog)   2
Felis_catus_76_6.2   (Domestic cat)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   6
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_76_1.0   (Tammar wallaby)   7
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Saccoglossus_kowalevskii_v3.0 3
Gallus_gallus_76_4   (Chicken)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Takifugu_rubripes_76_4   (Torafugu)   3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3
Astyanax_mexicanus_76   (Mexican tetra)   3
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 1
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   3
Helobdella_robusta_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 2
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 2
Drosophila_persimilis_1.3 1
Drosophila_suzukii 4
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 2
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   4
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   1
Acropora_digitifera_v1.0 2
Proterospongia_sp._ATCC_50818_ 2
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Malassezia_globosa_CBS_7966_ 2
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 1
Piloderma_croceum_F_1598_v1.0 0
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1
Hebeloma_cylindrosporum_h7_v2.0 1
Punctularia_strigosozonata_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Dichomitus_squalens 1
Trametes_versicolor_v1.0 2
Tremella_mesenterica_   (Witches' butter)   0
Podospora_anserina_ 1
Neurospora_tetrasperma_ 1
Neurospora_crassa_OR74A_ 1
Verticillium_dahliae_VdLs.17_ 1
Nectria_haematococca_mpVI_ 1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 1
Septoria_musiva_v1.0 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 1
Penicillium_marneffei_ATCC_18224_ 1
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 5
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 1
Pinus_taeda   (Loblolly pine)   8
Picea_abies   (Norway spruce)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   1
Glycine_max_v109   (Soybean)   1
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   4
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 1
Triticum_urartu_22 1
Aegilops_tauschii_22 7
Oryza_barthii_22   (African wild rice)   3
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 5
Oryza_punctata_22 2
Oryza_nivara_22 2
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   2
Sorghum_bicolor_   (Sorghum)   9
Musa_balbisiana   (Balbis banana)   1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Volvox_carteri_f._nagariensis_ 2
Chlamydomonas_reinhardtii_4.0 2
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 2
Giardia_lamblia_2.3 2
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_sojae_1.1 0
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 1
Tetrahymena_thermophila_SB210_1_ 3
Neospora_caninum 4
Toxoplasma_gondii_VEG 5
Toxoplasma_gondii_ME49 5
Toxoplasma_gondii_GT1 4
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 2
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 2
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Emiliania_huxleyi_CCMP1516_ 2
Rivularia_sp._PCC_7116 1
Anabaena_sp._90 1
Frankia_alni_ACN14a 1
Thermobifida_fusca_YX 1
Streptomyces_bingchenggensis_BCW-1 1
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 1
Mycobacterium_gilvum_PYR-GCK 1
Corynebacterium_variabile_DSM_44702 1
Fluviicola_taffensis_DSM_16823 1
Desulfococcus_oleovorans_Hxd3 1
Azoarcus_sp._KH32C 1
Cupriavidus_taiwanensis_LMG_19424 0
Burkholderia_thailandensis_E264 1
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 1
Gallionella_capsiferriformans_ES-2 0
Tolumonas_auensis_DSM_9187 0
Photobacterium_profundum_SS9 0
Shewanella_oneidensis_MR-1 1
Glaciecola_nitratireducens_FR1064 1
Hahella_chejuensis_KCTC_2396 0
gamma_proteobacterium_HdN1 1
Xenorhabdus_nematophila_ATCC_19061 0
Edwardsiella_ictaluri_93-146 0
Klebsiella_pneumoniae_NTUH-K2044 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Coccidioides_posadasii_str._Silveira_ 1
Histoplasma_capsulatum_H143 1
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 4
Plasmodium_falciparum_HB3_ 2
Plasmodium_falciparum_Dd2_ 2
Frankia_sp._CcI3 1
Streptomyces_rapamycinicus_NRRL_5491 1
Actinoplanes_friuliensis_DSM_7358 1
Geobacter_sp._M18 1
Burkholderia_cenocepacia_J2315 0
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_BisB5 0
Rhodopseudomonas_palustris_BisB18 0
Thalassolituus_oleivorans_MIL-1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Methylophaga_sp._JAM7 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   3
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   5
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   6
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   4
Tupaia_belangeri_69   (Northern tree shrew)   5
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3
Canis_familiaris_69_3.1   (Dog)   2
Felis_catus_69   (Domestic cat)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   6
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_69_1.0   (Tammar wallaby)   7
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2
Malus_x_domestica_(Duplicate)   (Apple)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 8
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
NCBI_plasmid_sequences_(Plasmids) 1
Protozoadb_2010_08_(Protozoadb) 37
STRING_v9.0.5_(STRING) 82
UniProt__viral_sequences_(Viral) 1
Uniprot_2018_03_genome 10752
NCBI_2017_08_genome 1443
TargetDB__(Targets) 4
NCBI_viral_sequences_(Viral) 1

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