SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - _gap_,56601,48403,_gap_

Domain combinations for _gap_,56601,48403,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56601 - beta-lactamase/transpeptidase-like
48403 - Ankyrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_melanogaster_76_5 (Fruit fly) 2

Pristionchus_pacificus_ 1

Meloidogyne_incognita_ (Southern root-knot nematode) 4

Meloidogyne_hapla_ 1

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 2

Caenorhabditis_elegans_76_235 (Roundworm) 6

Caenorhabditis_briggsae_2 1

Mnemiopsis_leidyi (Sea walnut) 1

Thecamonas_trahens_ATCC_50062_ 0

Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 2

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 3

Longest transcript per gene
Genome Number

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 1

Others
Genome Number

Loa_loa_v3.3_(Request) (Eye worm) 1

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 1

STRING_v9.0.5_(STRING) 7

NCBI_2017_08_genome 44

Uniprot_2018_03_genome 747

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]