SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57184,52540,_gap_,57903,57903 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
52540 - P-loop containing nucleoside triphosphate hydrolases
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Danio_rerio_76_9   (Zebrafish)   1

Longest transcript per gene
Genome     Number
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 76
NCBI_2017_08_genome 16

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