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  Home > SCOP hierarchy > Domain combination - _gap_,57184,57184,57184,_gap_,57184,57184,_gap_

Domain combinations for _gap_,57184,57184,57184,_gap_,57184,57184,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gadus_morhua_76_1   (Atlantic cod)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Lottia_gigantea_   (Owl limpet)   0
Capitella_sp._I_ 0
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Hydra_vulgaris 0
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Guillardia_theta_CCMP2712_v1.0_ 0

Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1

Longest transcript per gene
Genome     Number
Gadus_morhua_69_1   (Atlantic cod)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 288
NCBI_2017_08_genome 3

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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