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Domain combinations for _gap_,57196,57196,57196,57196,57196,57196,_gap_,57997 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57997 - Tropomyosin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Meleagris_gallopavo_76_2   (Turkey)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Helobdella_robusta_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 377
NCBI_2017_08_genome 43

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