SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57196,57196,57196,57196,57196,_gap_,57196,57196,57196,57196,57196,57196,57196,57196,_gap_,58104,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
58104 - Methyl-accepting chemotaxis protein (MCP) signaling domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Danio_rerio_76_9   (Zebrafish)   2
Helobdella_robusta_ 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1

Longest transcript per gene
Genome     Number
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 2070
NCBI_2017_08_genome 50

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