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Domain combinations for _gap_,57196,57196,_gap_,57196,_gap_,57196,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Saccoglossus_kowalevskii_v3.0 0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Oikopleura_dioica 0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Pristionchus_pacificus_ 0
Onchocerca_volvulus_22 0
Caenorhabditis_remanei_ 0
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 0
Acropora_digitifera_v1.0 0
Amphimedon_queenslandica 0

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Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Felis_catus_69   (Domestic cat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 115
NCBI_2017_08_genome 5

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