SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57196,57196,_gap_,57196,_gap_,57196,_gap_,57196,_gap_,57196 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Capitella_sp._I_ 0

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 70
NCBI_2017_08_genome 3

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