SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57196,57535,57535,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57535 - Complement control module/SCR domain
57535 - Complement control module/SCR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Vicugna_pacos_76_1   (Alpaca)   1
Saccoglossus_kowalevskii_v3.0 1
Acropora_digitifera_v1.0 0

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Vicugna_pacos_69_1   (Alpaca)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 91
NCBI_2017_08_genome 17

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