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Domain combinations for _gap_,57196,_gap_,49464,_gap_,101898,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
49464 - Carboxypeptidase regulatory domain-like
101898 - NHL repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Sorex_araneus_76_1   (European shrew)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   5
Adineta_vaga 0

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2

Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Sorex_araneus_69_1   (European shrew)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 400
NCBI_2017_08_genome 62

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