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Domain combinations for _gap_,57196,_gap_,49899,49899,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
49899 - Concanavalin A-like lectins/glucanases
49899 - Concanavalin A-like lectins/glucanases
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Bos_taurus_76_3.1   (Cattle)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Heliconius_melpomene_   (Postman butterfly)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Lucilia_cuprina   (Australian sheep blowfly)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Mnemiopsis_leidyi   (Sea walnut)   0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Bos_taurus_69_3.1   (Cattle)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Oryzias_latipes_69_1   (Japanese medaka)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0

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Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
STRING_v9.0.5_(STRING) 4
NCBI_2017_08_genome 73
Uniprot_2018_03_genome 136

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