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Domain combinations for _gap_,57196,_gap_,57535,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57535 - Complement control module/SCR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Vicugna_pacos_76_1   (Alpaca)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Oikopleura_dioica 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Caenorhabditis_brenneri_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0

Strains
Genome     Number
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0

Longest transcript per gene
Genome     Number
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Vicugna_pacos_69_1   (Alpaca)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Caenorhabditis_elegans_69_215   (Roundworm)   0

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 52
STRING_v9.0.5_(STRING) 0

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