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Home > SCOP hierarchy > Domain combination - _gap_,57196,_gap_,57535,_gap_

Domain combinations for _gap_,57196,_gap_,57535,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Vicugna_pacos_76_1 (Alpaca) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Oikopleura_dioica 0

Meloidogyne_incognita_ (Southern root-knot nematode) 0

Caenorhabditis_brenneri_ 0

Caenorhabditis_elegans_76_235 (Roundworm) 0

Caenorhabditis_briggsae_2 0

Strains
Genome Number

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 0

Longest transcript per gene
Genome Number

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Vicugna_pacos_69_1 (Alpaca) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Caenorhabditis_elegans_69_215 (Roundworm) 0

Others
Genome Number

Loa_loa_v3.3_(Request) (Eye worm) 0

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 0

STRING_v9.0.5_(STRING) 0

NCBI_2017_08_genome 2

Uniprot_2018_03_genome 52

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