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Home > SCOP hierarchy > Domain combination - _gap_,57256,_gap_,100895,48726,57362,57362,50242

Domain combinations for _gap_,57256,_gap_,100895,48726,57362,57362,50242 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Pongo_abelii_76_2 (Sumatran orangutan) 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Takifugu_rubripes_76_4 (Torafugu) 1

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Oryzias_latipes_76_1 (Japanese medaka) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Longest transcript per gene
Genome Number

Pongo_abelii_69_2 (Sumatran orangutan) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Oryzias_latipes_69_1 (Japanese medaka) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Others
Genome Number

STRING_v9.0.5_(STRING) 5

Uniprot_2018_03_genome 544

NCBI_2017_08_genome 35

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