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Home > SCOP hierarchy > Domain combination - _gap_,57424,_gap_,50494

Domain combinations for _gap_,57424,_gap_,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Microcebus_murinus_76_1 (Gray mouse lemur) 0

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ochotona_princeps_76 (American pika) 0

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Saccoglossus_kowalevskii_v3.0 0

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 0

Danaus_plexippus_OGS1.0 (Monarch butterfly) 0

Nasonia_vitripennis_ (Jewel wasp) 0

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 1

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Linepithema_humile_v1.1 (Argentine ant) 0

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 0

Solenopsis_invicta_v.2.2.3 (Red fire ant) 0

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 0

Atta_cephalotes_v1.1 0

Lucilia_cuprina (Australian sheep blowfly) 0

Drosophila_grimshawi_1.3 0

Drosophila_willistoni_1.3 0

Drosophila_pseudoobscura_2.13 0

Drosophila_persimilis_1.3 0

Drosophila_suzukii 0

Drosophila_yakuba_1.3 0

Drosophila_simulans_1.3 0

Drosophila_sechellia_1.3 0

Drosophila_melanogaster_76_5 (Fruit fly) 0

Drosophila_erecta_1.3 0

Drosophila_ananassae_1.3 0

Drosophila_virilis_1.2 0

Drosophila_mojavensis_1.3 0

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 0

Anopheles_darlingi_22 (American malaria mosquito) 0

Anopheles_gambiae_49_3j (African malaria mosquito) 0

Tribolium_castaneum_3.0 (Red flour beetle) 0

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 0

Acyrthosiphon_pisum_ (Pea aphid) 0

Rhodnius_prolixus_22 0

Daphnia_pulex_ (Common water flea) 0

Mnemiopsis_leidyi (Sea walnut) 1

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Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 0

Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase) (African malaria mosquito) 0

Ascaris_suum_Victoria/Ghent_ (Pig roundworm) 0

Longest transcript per gene
Genome Number

Microcebus_murinus_69_1 (Gray mouse lemur) 0

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ochotona_princeps_69 (American pika) 0

Felis_catus_69 (Domestic cat) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Drosophila_melanogaster_69_5 (Fruit fly) 0

Others
Genome Number

STRING_v9.0.5_(STRING) 1

NCBI_2017_08_genome 6

Uniprot_2018_03_genome 243

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