SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57567,_gap_,57567,_gap_,57603,_gap_,57567,57424,57424,57424,57424,_gap_,57424,82895,82895,57567,82895,_gap_,49785,57424,_gap_,57424,57424,82895,82895,57567,82895,82895,82895,57567,82895,82895,57567,82895,82895,57567,82895,82895,_gap_,82895,_gap_,57603,82895,82895,82895,82895,57567,57603,82895,_gap_,82895,82895,_gap_,57567,_gap_,82895,57567,82895,57567,_gap_,57567,57603,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57567 - Serine protease inhibitors
57567 - Serine protease inhibitors
57603 - FnI-like domain
57567 - Serine protease inhibitors
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
49785 - Galactose-binding domain-like
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57603 - FnI-like domain
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
57603 - FnI-like domain
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
82895 - TSP-1 type 1 repeat
57567 - Serine protease inhibitors
57567 - Serine protease inhibitors
57603 - FnI-like domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ailuropoda_melanoleuca_76_1   (Giant panda)   1

Longest transcript per gene
Genome     Number
Ailuropoda_melanoleuca_69_1   (Giant panda)   1

Others
Genome     Number
NCBI_2017_08_genome 0
Uniprot_2018_03_genome 475

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