SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57581,57196,57581,_gap_,57184,57184,57581,57184,57581,57581,57184,57196,57184,57184,57196,57196,57581,57196,57196,57581,57196,57196,57184,57196,57196,57581,57184,57196,57196,57581,57196,57184,57184,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57581 - TB module/8-cys domain
57196 - EGF/Laminin
57581 - TB module/8-cys domain
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57581 - TB module/8-cys domain
57184 - Growth factor receptor domain
57581 - TB module/8-cys domain
57581 - TB module/8-cys domain
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57581 - TB module/8-cys domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57581 - TB module/8-cys domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57581 - TB module/8-cys domain
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57581 - TB module/8-cys domain
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   1
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   2

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 9537
NCBI_2017_08_genome 18

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