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  Home > SCOP hierarchy > Domain combination - _gap_,57625,57625,57625,_gap_,56487,56436,57440,57424,57414,57424,56487,57424,56487,50494

Domain combinations for _gap_,57625,57625,57625,_gap_,56487,56436,57440,57424,57414,57424,56487,57424,56487,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57625 - Invertebrate chitin-binding proteins
57625 - Invertebrate chitin-binding proteins
57625 - Invertebrate chitin-binding proteins
56487 - SRCR-like
56436 - C-type lectin-like
57440 - Kringle-like
57424 - LDL receptor-like module
57414 - Hairpin loop containing domain-like
57424 - LDL receptor-like module
56487 - SRCR-like
57424 - LDL receptor-like module
56487 - SRCR-like
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nasonia_vitripennis_   (Jewel wasp)   1
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 777
NCBI_2017_08_genome 83

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.